RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SRSF9Q13242 221 aaKnown RBP eCLIP10.69□□□□□ -0.7
DNMT1-203ENST00000540357 ZNF329Q86UD4 541 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 C16orf97H3BN30 126 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 K7EN84 100 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 GOSR1O95249 250 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 OR2K2Q8NGT1 345 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 NEUROG1Q92886 237 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 FAM201AQ5SY85 155 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 SDK2Q58EX2 2172 aa10.69□□□□□ -0.7
DNMT1-203ENST00000540357 ESDP10768 282 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 SAMD13Q5VXD3 122 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 PSG1P11464 419 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
DNMT1-203ENST00000540357 TMPRSS3P57727 454 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 TRIP6Q15654 476 aaKnown RBP10.68□□□□□ -0.7
DNMT1-203ENST00000540357 Q1RN00 199 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 TMEM14BQ9NUH8 114 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 MUC22E2RYF6 1773 aaPredicted RBP10.68□□□□□ -0.7
DNMT1-203ENST00000540357 HBDP02042 147 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 NPPCP23582 126 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 MUC21Q5SSG8 566 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 WDR86Q86TI4 376 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 OR10W1Q8NGF6 305 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 SPRR3Q9UBC9 169 aa10.68□□□□□ -0.7
DNMT1-203ENST00000540357 MFAP4P55083 255 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 ASXL3Q9C0F0 2248 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 PRSS8Q16651 343 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 SPANXN1Q5VSR9 72 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 C8orf46Q8TAG6 207 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 FGF23Q9GZV9 251 aaPredicted RBP10.67□□□□□ -0.7
DNMT1-203ENST00000540357 CST9LQ9H4G1 147 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 RPUSD1Q9UJJ7 312 aaKnown RBP10.67□□□□□ -0.7
DNMT1-203ENST00000540357 HILPDAQ9Y5L2 63 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 EP400Q96L91 3159 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 GFRALQ6UXV0 394 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 F2Z2F3 143 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 SRCAPQ6ZRS2 3230 aa10.67□□□□□ -0.7
DNMT1-203ENST00000540357 IGHV1-18A0A0C4DH31 117 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 SLAQ13239 276 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 CT83Q5H943 113 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 TCRAP04437 139 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 RNASE2P10153 161 aaKnown RBP10.66□□□□□ -0.7
DNMT1-203ENST00000540357 IGLL1P15814 213 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
DNMT1-203ENST00000540357 RCHY1Q96PM5 261 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 ZNF503-AS2A6NEH8 195 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 TOMM40O96008 361 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 IL4P05112 153 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 ZNF883P0CG24 379 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 DTX1Q86Y01 620 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 A0A087X0K7 114 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 PMS2P5A8MQ11 134 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 ATP5LO75964 103 aa10.66□□□□□ -0.7
DNMT1-203ENST00000540357 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 CDKN1BP46527 198 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 IGKV1D-17A0A075B6S4 117 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 C9orf106Q8NAJ2 232 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 C1RLQ9NZP8 487 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 TTC9CQ8N5M4 171 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 TRGV9Q99603 122 aa10.65□□□□□ -0.7
DNMT1-203ENST00000540357 CD3EP07766 207 aa10.65□□□□□ -0.71
DNMT1-203ENST00000540357 TDRG1Q3Y452 100 aa10.65□□□□□ -0.71
DNMT1-203ENST00000540357 RPRMLQ8N4K4 120 aa10.65□□□□□ -0.71
DNMT1-203ENST00000540357 TMEM167AQ8TBQ9 72 aa10.65□□□□□ -0.71
DNMT1-203ENST00000540357 MYOD1P15172 320 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 PRR20EP86478 221 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 PRR20CP86479 221 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 PRR20DP86480 221 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 PRR20BP86481 221 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 PRR20AP86496 221 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 ATP1A1-AS1Q5TC04 95 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 CCDC144NLQ6NUI1 221 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 A0A0G2JLM5 398 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 CACNG7P62955 275 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 KLF5Q13887 457 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-203ENST00000540357 PSG8Q9UQ74 426 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 SPACA3Q8IXA5 215 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 C18orf15Q96N68 181 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 SHANK1Q9Y566 2161 aa10.64□□□□□ -0.71
DNMT1-203ENST00000540357 IGLC7A0M8Q6 106 aa10.63□□□□□ -0.71
DNMT1-203ENST00000540357 C9orf172C9J069 976 aa10.63□□□□□ -0.71
DNMT1-203ENST00000540357 FER1L6-AS1Q8NA97 138 aa10.63□□□□□ -0.71
DNMT1-203ENST00000540357 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
DNMT1-203ENST00000540357 NKX2-8O15522 239 aa10.63□□□□□ -0.71
DNMT1-203ENST00000540357 GUSBP1Q15486 140 aa10.63□□□□□ -0.71
DNMT1-203ENST00000540357 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms