RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CCL25O15444 150 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 RAMP3O60896 148 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 OR2J3O76001 311 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 ACTL6BO94805 426 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 C3orf79P0CE67 100 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 GYPEP15421 78 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 EGR1P18146 543 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 PMCHP20382 165 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 DUTP33316 252 aaKnown RBP6.25□□□□□ -1.41
CCDC60-204ENST00000539847 AMTP48728 403 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 GNG10P50151 68 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 ZNF83P51522 516 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 KRTDAPP60985 99 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 LRRC10Q5BKY1 277 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 PQLC2Q6ZP29 291 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 TCF23Q7RTU1 214 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 MYPOPQ86VE0 399 aaPredicted RBP6.25□□□□□ -1.41
CCDC60-204ENST00000539847 NIT1Q86X76 327 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 PRIMA1Q86XR5 153 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 MUC15Q8N387 334 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 MGST2Q99735 147 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 DERL1Q9BUN8 251 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 ST20Q9HBF5 79 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 SEPSECSQ9HD40 501 aaKnown RBP6.25□□□□□ -1.41
CCDC60-204ENST00000539847 RAB9BQ9NP90 201 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 TMEM160Q9NX00 188 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 NAT8BQ9UHF3 227 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 YTHDF2Q9Y5A9 579 aaKnown RBP6.25□□□□□ -1.41
CCDC60-204ENST00000539847 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
CCDC60-204ENST00000539847 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 ROS1P08922 2347 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 TRAV38-1A0A0B4J264 116 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 A0A1B0GUS0 222 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 IGLC7A0M8Q6 106 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 IQCF6A8MYZ5 107 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 C12orf77C9JDV5 145 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 H0YJW9 148 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 BMPR1BO00238 502 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 HSPB6O14558 160 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
CCDC60-204ENST00000539847 SMPD2O60906 423 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 LY6G6DO95868 133 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 HAND1O96004 215 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 CA2P00918 260 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 HBZP02008 142 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 APCSP02743 223 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 RFPL3SP0C7P2 107 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 THBS3P49746 956 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 GNG4P50150 75 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 PPOXP50336 477 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 EDDM3BP56851 147 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 TAS2R45P59539 299 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 PSG7Q13046 419 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 EFNB3Q15768 340 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 Q5PR19 223 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 ATP5L2Q7Z4Y8 100 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.24□□□□□ -1.41
CCDC60-204ENST00000539847 OR8B3Q8NGG8 313 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 OR4A16Q8NH70 328 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 TSKUQ8WUA8 353 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 BCL2L2Q92843 193 aaPredicted RBP6.24□□□□□ -1.41
CCDC60-204ENST00000539847 APH1AQ96BI3 265 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 SMIM12Q96EX1 92 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 C5orf30Q96GV9 206 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 ZNF488Q96MN9 340 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 OR2V2Q96R30 315 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 OR8B2Q96RD0 313 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 SMR3AQ99954 134 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 OR2D2Q9H210 308 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
CCDC60-204ENST00000539847 TECRQ9NZ01 308 aaKnown RBP6.24□□□□□ -1.41
CCDC60-204ENST00000539847 ARHGAP21Q5T5U3 1957 aa6.24□□□□□ -1.41
CCDC60-204ENST00000539847 SPINT2O43291 252 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 RHBDL1O75783 438 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 GRPP07492 148 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 OR5AL1P0C617 328 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 CA6P23280 308 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 GDF1P27539 372 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 ERVK-16P61578 105 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 HSPE1P61604 102 aaKnown RBP6.23□□□□□ -1.41
CCDC60-204ENST00000539847 MZT1Q08AG7 82 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 ZNF816Q0VGE8 651 aaPredicted RBP6.23□□□□□ -1.41
CCDC60-204ENST00000539847 POU2AF1Q16633 256 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 OR8I2Q8N0Y5 310 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 LINC01560Q8TB33 94 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 ABHD3Q8WU67 409 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 NEUROG1Q92886 237 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 GRAMD2BQ96HH9 432 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 PMCHL2Q9BQD1 86 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
CCDC60-204ENST00000539847 MS4A6AQ9H2W1 248 aa6.23□□□□□ -1.41
CCDC60-204ENST00000539847 SOX21Q9Y651 276 aaPredicted RBP6.23□□□□□ -1.41
CCDC60-204ENST00000539847 FBN1P35555 2871 aaKnown RBP6.22□□□□□ -1.41
CCDC60-204ENST00000539847 A0A1W2PPR1 153 aa6.22□□□□□ -1.41
CCDC60-204ENST00000539847 SLC17A3O00476 420 aa6.22□□□□□ -1.41
CCDC60-204ENST00000539847 RRHO14718 337 aa6.22□□□□□ -1.41
CCDC60-204ENST00000539847 RBMXL2O75526 392 aaKnown RBP6.22□□□□□ -1.41
CCDC60-204ENST00000539847 TRAPPC6AO75865 159 aa6.22□□□□□ -1.41
CCDC60-204ENST00000539847 HLA-DRB1P01911 266 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms