RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CD5P06127 495 aa12.33□□□□□ -0.44
DDB1-215ENST00000539712 NPPCP23582 126 aa12.33□□□□□ -0.44
DDB1-215ENST00000539712 BMI1P35226 326 aa12.33□□□□□ -0.44
DDB1-215ENST00000539712 CMC4P56277 68 aaPredicted RBP12.33□□□□□ -0.44
DDB1-215ENST00000539712 TNFRSF9Q07011 255 aa12.33□□□□□ -0.44
DDB1-215ENST00000539712 CCDC190Q86UF4 302 aa12.33□□□□□ -0.44
DDB1-215ENST00000539712 TRAV30A0A087WSZ9 112 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 CCR6P51684 374 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 RND2P52198 227 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 RBMS2Q15434 407 aaKnown RBP12.32□□□□□ -0.44
DDB1-215ENST00000539712 PYDC2Q56P42 97 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 LYG2Q86SG7 212 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
DDB1-215ENST00000539712 RPS10-NUDT3A0A1W2PQS6 291 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 PITX3O75364 302 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 SLC25A4P12235 298 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 NPY1RP25929 384 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 OR10J1P30954 320 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 YPEL3P61236 119 aaPredicted RBP12.31□□□□□ -0.44
DDB1-215ENST00000539712 PAFAH1B2P68402 229 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 SMCO1Q147U7 214 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 OR1S2Q8NGQ3 325 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 METTL26Q96S19 204 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 RBKSQ9H477 322 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 CACFD1Q9UGQ2 172 aa12.31□□□□□ -0.44
DDB1-215ENST00000539712 P2RY1P47900 373 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 DEFB131AP59861 70 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 LEMD1Q68G75 181 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 LGI3Q8N145 548 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 TOMM5Q8N4H5 51 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 U3KQ87 197 aa12.3□□□□□ -0.44
DDB1-215ENST00000539712 A0A1W2PS18 150 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 K7EQG2 157 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 DNASE2O00115 360 aaPredicted RBP12.29□□□□□ -0.44
DDB1-215ENST00000539712 RPL11P62913 178 aaKnown RBP12.29□□□□□ -0.44
DDB1-215ENST00000539712 SRPXP78539 464 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 USF2Q15853 346 aaPredicted RBP12.29□□□□□ -0.44
DDB1-215ENST00000539712 TMEM128Q5BJH2 165 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 TMED4Q7Z7H5 227 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 TMEM231Q9H6L2 316 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 AGRNO00468 2067 aa12.29□□□□□ -0.44
DDB1-215ENST00000539712 CCDC160A6NGH7 325 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 MPTX1A8MV57 137 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 ZNF701M0R085 212 aaPredicted RBP12.28□□□□□ -0.44
DDB1-215ENST00000539712 GIG44P09565 113 aaPredicted RBP12.28□□□□□ -0.44
DDB1-215ENST00000539712 ATF4P18848 351 aaPredicted RBP12.28□□□□□ -0.44
DDB1-215ENST00000539712 FAUP35544 74 aaKnown RBP12.28□□□□□ -0.44
DDB1-215ENST00000539712 AP3S2P59780 193 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 C16orf54Q6UWD8 224 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 Q8WTZ3 238 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 GLMPQ8WWB7 406 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 SRRQ9GZT4 340 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 RABAC1Q9UI14 185 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
DDB1-215ENST00000539712 KMT2AQ03164 3969 aa12.27□□□□□ -0.44
DDB1-215ENST00000539712 BIRC6Q9NR09 4857 aa12.27□□□□□ -0.44
DDB1-215ENST00000539712 IFNA10P01566 189 aa12.27□□□□□ -0.45
DDB1-215ENST00000539712 ANXA3P12429 323 aa12.27□□□□□ -0.45
DDB1-215ENST00000539712 ETFRF1Q6IPR1 90 aa12.27□□□□□ -0.45
DDB1-215ENST00000539712 NOXA1Q86UR1 476 aa12.27□□□□□ -0.45
DDB1-215ENST00000539712 DEDD2Q8WXF8 326 aa12.27□□□□□ -0.45
DDB1-215ENST00000539712 ACY3Q96HD9 319 aa12.27□□□□□ -0.45
DDB1-215ENST00000539712 SLC25A21Q9BQT8 299 aaPredicted RBP12.27□□□□□ -0.45
DDB1-215ENST00000539712 IGKV1D-37A0A075B6S9 117 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 DUXBA0A1W2PPF3 345 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 SCGB2A1O75556 95 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 TOMM40O96008 361 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 RD3LP0DJH9 198 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 S100A5P33763 92 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 PPP1R1AQ13522 171 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 STXBP6Q8NFX7 210 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 GATAD1Q8WUU5 269 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 GRAMD2BQ96HH9 432 aa12.26□□□□□ -0.45
DDB1-215ENST00000539712 BUB3O43684 328 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 SFT2D2O95562 160 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 IL4P05112 153 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 HNRNPCP07910 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDB1-215ENST00000539712 PSG1P11464 419 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 SLC25A6P12236 298 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 ATP5IP56385 69 aaPredicted RBP12.25□□□□□ -0.45
DDB1-215ENST00000539712 PMS2P11Q13670 270 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 GAMTQ14353 236 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 BAK1Q16611 211 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
DDB1-215ENST00000539712 OR1S1Q8NH92 325 aa12.25□□□□□ -0.45
DDB1-215ENST00000539712 SDHCQ99643 169 aaPredicted RBP12.25□□□□□ -0.45
DDB1-215ENST00000539712 CXorf65A6NEN9 183 aa12.24□□□□□ -0.45
DDB1-215ENST00000539712 JTBO76095 146 aa12.24□□□□□ -0.45
DDB1-215ENST00000539712 ZNF688P0C7X2 276 aa12.24□□□□□ -0.45
DDB1-215ENST00000539712 VAMP1P23763 118 aa12.24□□□□□ -0.45
DDB1-215ENST00000539712 GPX4P36969 197 aaPredicted RBP12.24□□□□□ -0.45
DDB1-215ENST00000539712 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
DDB1-215ENST00000539712 RARRES2Q99969 163 aa12.24□□□□□ -0.45
DDB1-215ENST00000539712 KNCNA6PVL3 124 aa12.23□□□□□ -0.45
DDB1-215ENST00000539712 CA1P00915 261 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms