RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ISLRO14498 428 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 COX7A1P24310 79 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 CD24P25063 80 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 IQCJQ1A5X6 159 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 TIGITQ495A1 244 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 TGIF2LXQ8IUE1 241 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 OR4C13Q8NGP0 309 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 LINC01560Q8TB33 94 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 WNK2Q9Y3S1 2297 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 C3orf36Q3SXR2 165 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 KIR3DL3Q8N743 410 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 OR1B1Q8NGR6 318 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
UBE3B-210ENST00000539599 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 LINC00305Q7Z4B0 112 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 PAM16Q9Y3D7 125 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 FAM87AP0C7U9 286 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 PMCHP20382 165 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 TNXAQ16473 311 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 C10orf113Q5VZT2 155 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 NDUFAF3Q9BU61 184 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 PAXXQ9BUH6 204 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-210ENST00000539599 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 CHD8Q9HCK8 2581 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
UBE3B-210ENST00000539599 A0A1W2PN81 502 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 GPR6P46095 362 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-210ENST00000539599 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 TMEM167AQ8TBQ9 72 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 USF1P22415 310 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-210ENST00000539599 SRIP30626 198 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 DLX6P56179 175 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 TAS2R45P59539 299 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 SNHG12Q9BXW3 62 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
UBE3B-210ENST00000539599 AMMECR1Q9Y4X0 333 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-210ENST00000539599 PPOXP50336 477 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 SELENOTP62341 195 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 MEF2CQ06413 473 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-210ENST00000539599 FOXC1Q12948 553 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 SLAQ13239 276 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 S4R3C0 116 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 TNFRSF13BO14836 293 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-210ENST00000539599 FSTL3O95633 263 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 KRTDAPP60985 99 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 CX3CL1P78423 397 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 NCOR2Q9Y618 2525 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 A0A1W2PRD5 423 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 A0A1W2PRF3 423 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 A0A1W2PRM7 423 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 TPTE2P1Q5T6R2 138 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
UBE3B-210ENST00000539599 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 IGLC7A0M8Q6 106 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 FAM90A27PA6NNH2 459 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 FNDC10F2Z333 226 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 BMPR1BO00238 502 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-210ENST00000539599 NOL4LQ96MY1 436 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-210ENST00000539599 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-210ENST00000539599 VWC2LB2RUY7 222 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 CDSNQ15517 529 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 ZNF705AQ6ZN79 300 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-210ENST00000539599 PDPNQ86YL7 162 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 TNFRSF19Q9NS68 423 aa11.27□□□□□ -0.61
UBE3B-210ENST00000539599 IGHV1-69-2A0A0G2JMI3 117 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
UBE3B-210ENST00000539599 CAMPP49913 170 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 TPPP2P59282 170 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 TBL2Q9Y4P3 447 aaKnown RBP11.26□□□□□ -0.61
UBE3B-210ENST00000539599 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 PEX7O00628 323 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 TMEM186Q96B77 213 aa11.26□□□□□ -0.61
UBE3B-210ENST00000539599 ZNF253O75346 499 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 NTF3P20783 257 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
UBE3B-210ENST00000539599 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms