RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 FNDC4Q9H6D8 234 aaPredicted RBP20.23■□□□□ 0.83
KLHL42-202ENST00000539176 TMEM167BQ9NRX6 74 aa20.23■□□□□ 0.83
KLHL42-202ENST00000539176 PLXNB1O43157 2135 aa20.23■□□□□ 0.83
KLHL42-202ENST00000539176 UBE2G2P60604 165 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 HES1Q14469 280 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 PQLC2Q6ZP29 291 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 BIN3Q9NQY0 253 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 DOK5Q9P104 306 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 CCDC168Q8NDH2 2452 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 ATP5G3P48201 142 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 ELOBQ15370 118 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 ADIRFQ15847 76 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 KLF17Q5JT82 389 aaPredicted RBP20.22■□□□□ 0.83
KLHL42-202ENST00000539176 FAM120AOSQ5T036 256 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 SPATA31B1PQ5VZV4 182 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 C1QL4Q86Z23 238 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 OR2T6Q8NHC8 308 aa20.22■□□□□ 0.83
KLHL42-202ENST00000539176 ZANQ9Y493 2812 aa20.21■□□□□ 0.83
KLHL42-202ENST00000539176 CRYGCP07315 174 aa20.21■□□□□ 0.83
KLHL42-202ENST00000539176 MLANAQ16655 118 aa20.21■□□□□ 0.83
KLHL42-202ENST00000539176 EAF1Q96JC9 268 aaPredicted RBP20.21■□□□□ 0.83
KLHL42-202ENST00000539176 FBXL15Q9H469 300 aa20.21■□□□□ 0.83
KLHL42-202ENST00000539176 TCRBV4S1A1TA0A5B7 111 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 RPL23P62829 140 aaKnown RBP20.2■□□□□ 0.82
KLHL42-202ENST00000539176 PLGLAQ15195 96 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 PFDN5Q99471 154 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 TEX22C9J3V5 150 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 MOSP00540 346 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 GATA3P23771 443 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 MIR17HGQ75NE6 70 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 OR1L4Q8NGR5 311 aa20.2■□□□□ 0.82
KLHL42-202ENST00000539176 SRSF12Q8WXF0 261 aaKnown RBP20.2■□□□□ 0.82
KLHL42-202ENST00000539176 F11RQ9Y624 299 aaKnown RBP20.2■□□□□ 0.82
KLHL42-202ENST00000539176 A0A0U1RQK1 487 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 NBR2O15453 112 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 AREGP15514 252 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 GNB1P62873 340 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 MMDQ15546 238 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 NPBQ8NG41 125 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 NPIPB3Q92617 1050 aa20.19■□□□□ 0.82
KLHL42-202ENST00000539176 SMAD7O15105 426 aaKnown RBP20.18■□□□□ 0.82
KLHL42-202ENST00000539176 NDUFA3O95167 84 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 REG1AP05451 166 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 BPIFB3P59826 476 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 Q8WTZ3 238 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 ITPR3Q14573 2671 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 PSMB11A5LHX3 300 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 NPPCP23582 126 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 UHRF2Q96PU4 802 aa20.18■□□□□ 0.82
KLHL42-202ENST00000539176 ABCA1O95477 2261 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 C8orf88P0DMB2 117 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 TMEM116Q8NCL8 245 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 OR51G1Q8NGK1 321 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 OR2T10Q8NGZ9 312 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 C11orf52Q96A22 123 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 FOXC2Q99958 501 aa20.17■□□□□ 0.82
KLHL42-202ENST00000539176 GATA2P23769 480 aaPredicted RBP20.16■□□□□ 0.82
KLHL42-202ENST00000539176 ANAPC16Q96DE5 110 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 MISP3Q96FF7 219 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 SLC25A33Q9BSK2 321 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 DNAJC4Q9NNZ3 241 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 YTHDF2Q9Y5A9 579 aaKnown RBP20.16■□□□□ 0.82
KLHL42-202ENST00000539176 CREBBPQ92793 2442 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 IGKV1D-37A0A075B6S9 117 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 FCN1O00602 326 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 TGOLN2O43493 480 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 SSBP2P81877 361 aaPredicted RBP20.16■□□□□ 0.82
KLHL42-202ENST00000539176 TRGV9Q99603 122 aa20.16■□□□□ 0.82
KLHL42-202ENST00000539176 COX7A2P2O60397 106 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 NDUFB4O95168 129 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 MFAP2P55001 183 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 SMUG1Q53HV7 270 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 ZNF343Q6P1L6 599 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 OR1L6Q8NGR2 347 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 TMEM37Q8WXS4 190 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 URGCP-MRPS24S4R325 110 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 NAV3Q8IVL0 2385 aa20.15■□□□□ 0.82
KLHL42-202ENST00000539176 CD99P14209 185 aa20.14■□□□□ 0.81
KLHL42-202ENST00000539176 TMEM11P17152 192 aa20.14■□□□□ 0.81
KLHL42-202ENST00000539176 ZFP82Q8N141 532 aa20.14■□□□□ 0.81
KLHL42-202ENST00000539176 Q8N6K4 173 aa20.14■□□□□ 0.81
KLHL42-202ENST00000539176 CSPG4Q6UVK1 2322 aa20.14■□□□□ 0.81
KLHL42-202ENST00000539176 TRBV24-1A0A075B6N3 115 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 ELOA3CA0A087WX78 387 aaPredicted RBP20.13■□□□□ 0.81
KLHL42-202ENST00000539176 J3QLI3 93 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 OR7C2O60412 319 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 CYB5R2Q6BCY4 276 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 SAV1Q9H4B6 383 aaPredicted RBP20.13■□□□□ 0.81
KLHL42-202ENST00000539176 H7BYZ3 331 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 EBI3Q14213 229 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 LINC01551Q86U37 167 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 C2CD4CQ8TF44 421 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 TNFRSF19Q9NS68 423 aa20.13■□□□□ 0.81
KLHL42-202ENST00000539176 ZNF469Q96JG9 3925 aaPredicted RBP20.13■□□□□ 0.81
KLHL42-202ENST00000539176 CNIH1O95406 144 aa20.12■□□□□ 0.81
KLHL42-202ENST00000539176 BRS3P32247 399 aa20.12■□□□□ 0.81
KLHL42-202ENST00000539176 RPS10P46783 165 aaKnown RBP20.12■□□□□ 0.81
KLHL42-202ENST00000539176 C10orf113Q5VZT2 155 aa20.12■□□□□ 0.81
KLHL42-202ENST00000539176 C16orf82Q7Z2V1 217 aa20.12■□□□□ 0.81
KLHL42-202ENST00000539176 SCO2A0A1W2PP80 73 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms