RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 A0A0G2JLM5 398 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 FAM223BA6NKX1 122 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 HMSDA8MTL9 139 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 SCGB2A1O75556 95 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 HNRNPCP07910 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 ELANEP08246 267 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 PPIFP30405 207 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 EIF2B2P49770 351 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 RHOGP84095 191 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 SLC38A11Q08AI6 406 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 FOXE3Q13461 319 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 BSXQ3C1V8 233 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 ACSM6Q6P461 480 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 FAM223AQ8IWN6 122 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 NECAP1Q8NC96 275 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 SMIM3Q9BZL3 60 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 TNFSF18Q9UNG2 199 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 HSPB11Q9Y547 144 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 G3V3Q6 166 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 SOX15O60248 233 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 MT-CO2P00403 227 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 IGHG4P01861 327 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 S100A11P31949 105 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 RAB9AP51151 201 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 DEFA5Q01523 94 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 NHLH2Q02577 135 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 CFHR3Q02985 330 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 AKR1C1Q04828 323 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 OR2F1Q13607 317 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 ATP6V1FQ16864 119 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 SLC16A13Q7RTY0 426 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 UBAC2Q8NBM4 344 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 OR5C1Q8NGR4 320 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 EEF1AKMT3Q96AZ1 226 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 CXorf58Q96LI9 332 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 FANCD2OSQ96PS1 177 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 AQP10Q96PS8 301 aa9.55□□□□□ -0.88
CLSTN3-208ENST00000538933 A0A0D9SG52 128 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 KANTRA0A1W2PQU2 76 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 DFFBO76075 338 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 NDUFB8O95169 186 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 IGLV1-40P01703 118 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 C4BPBP20851 252 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 MFAP2P55001 183 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 DLK1P80370 383 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 CLINT1Q14677 625 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 Q56UQ5 140 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 OR11H4Q8NGC9 324 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 TMEM170AQ8WVE7 144 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 CACNG8Q8WXS5 425 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 ACY3Q96HD9 319 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 USMG5Q96IX5 58 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 TMEM147Q9BVK8 224 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 C19orf73Q9NVV2 129 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 S4R3C0 116 aa9.54□□□□□ -0.88
CLSTN3-208ENST00000538933 UBE2L5PA0A1B0GUS4 154 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 BRI3O95415 125 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 IFNA5P01569 189 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 GP9P14770 177 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 PSMB8P28062 276 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 NPBWR1P48145 328 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 MFAP4P55083 255 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 ZNF345Q14585 488 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 Q8N1Y9 231 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 VN1R17PQ8TDU5 208 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 PPP1R14BQ96C90 147 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 GGACTQ9BVM4 153 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 ARL6Q9H0F7 186 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 UQCC1Q9NVA1 299 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 C21orf62Q9NYP8 219 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 FBXL17Q9UF56 701 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 DMRT1Q9Y5R6 373 aa9.53□□□□□ -0.88
CLSTN3-208ENST00000538933 TRBV7-1A0A0A6YYK4 115 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 TRBV9A0A0B4J1U6 114 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 RNF222A6NCQ9 220 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 PMS2P5A8MQ11 134 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 A8MZ25 164 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 BOLA2-SMG1P6H3BVE0 249 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 I3L2K1 104 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 K7EIM0 57 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 GNG7O60262 68 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 IGHV3-11P01762 117 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 IGHV3-23P01764 117 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 RND2P52198 227 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 NKX2-5P52952 324 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 ZNF266Q14584 549 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 MLANAQ16655 118 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 OR11H1Q8NG94 326 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 SCGB1C1Q8TD33 95 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 SCARB1Q8WTV0 552 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 C4orf3Q8WVX3 66 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 ATP5SQ99766 215 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 ARPC5LQ9BPX5 153 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 KLK15Q9H2R5 256 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms