RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 SNRNP40Q96DI7 357 aaKnown RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 AMMECR1Q9Y4X0 333 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 CABIN1Q9Y6J0 2220 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 TET2Q6N021 2002 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 IGHV1-24A0A0C4DH33 117 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 DEFB108AA8MXU0 73 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 IQCF6A8MYZ5 107 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 FCGR2BP31994 310 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 CYB561P49447 251 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 HBBP68871 147 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 PAX2Q02962 417 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 SRYQ05066 204 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 OR13A1Q8NGR1 328 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 Q8TCH9 128 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 NPIPB3Q92617 1050 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 TMEM14BQ9NUH8 114 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 IDI2-AS1Q9NZ38 188 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 GNG12Q9UBI6 72 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 B4GALT7Q9UBV7 327 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 FREM1Q5H8C1 2179 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 TRAV8-6A0A0B4J262 113 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 C7orf71A4D174 169 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 NPIPB5A8MRT5 1133 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 HIGD1CA8MV81 97 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 C2CD4DB7Z1M9 353 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 C15orf65H3BRN8 121 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 APOBEC3AP31941 199 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-209ENST00000538654 GPR6P46095 362 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-209ENST00000538654 SMIM21Q3B7S5 101 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 ACP7Q6ZNF0 438 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 MDP1Q86V88 176 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 FER1L6-AS1Q8NA97 138 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 SLC25A33Q9BSK2 321 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 SIT1Q9Y3P8 196 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 TRAV3A0A0B4J244 114 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 A6NDN8 102 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 C17orf100A8MU93 164 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 G3V4G9 280 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 J3QL48 77 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
SNHG1-209ENST00000538654 BPIFA4PQ86YQ2 179 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 VKORC1L1Q8N0U8 176 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 RFESDQ8TAC1 157 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 FAM222BQ8WU58 562 aa7.36□□□□□ -1.23
SNHG1-209ENST00000538654 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-209ENST00000538654 PEX7O00628 323 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 ENSAO43768 121 aaKnown RBP7.35□□□□□ -1.23
SNHG1-209ENST00000538654 GHRHP01286 108 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 GATA2P23769 480 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-209ENST00000538654 C5orf64Q2M2E5 130 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 SSX8Q7RTT4 187 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 ZNF430Q9H8G1 570 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-209ENST00000538654 PRNDQ9UKY0 176 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 PRR33A8MZF0 331 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 WIPF1O43516 503 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 PROP1O75360 226 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 COX8AP10176 69 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 HTR1DP28221 377 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 UFSP1Q6NVU6 142 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 H1FXQ92522 213 aaKnown RBP7.35□□□□□ -1.23
SNHG1-209ENST00000538654 FAM234AQ9H0X4 552 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 CXXC4Q9H2H0 198 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 ZNF257Q9Y2Q1 563 aa7.35□□□□□ -1.23
SNHG1-209ENST00000538654 MYO9BQ13459 2157 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 A8MWL6 223 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 H3BRM9 83 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 SMRP1Q8NCR6 262 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 FAM173AQ9BQD7 235 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 NDFIP1Q9BT67 221 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 ZNF835Q9Y2P0 537 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 A0A087X0K7 114 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 PINLYPA6NC86 204 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 C9orf118A6NHY6 69 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 WNT9BO14905 357 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 DUSP3P51452 185 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-209ENST00000538654 C5orf47Q569G3 176 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 Q6ZR03 302 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 TMEM251Q8N6I4 163 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-209ENST00000538654 OR1B1Q8NGR6 318 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 DDB2Q92466 427 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 ADTRPQ96IZ2 230 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 OR51B2Q9Y5P1 312 aa7.34□□□□□ -1.23
SNHG1-209ENST00000538654 LY6G6EA0A0G2JKS1 128 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 APOA2P02652 100 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 CCL11P51671 97 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 RIPPLY3P57055 190 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 LTC4SQ16873 150 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF329Q86UD4 541 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 OR9G4Q8NGQ1 327 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 ZNF714Q96N38 554 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 VKORC1Q9BQB6 163 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 GFRA4Q9GZZ7 299 aa7.33□□□□□ -1.24
SNHG1-209ENST00000538654 RPP21Q9H633 154 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms