RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MLNRO43193 412 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 STAG3L3P0CL85 134 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 CD28P10747 220 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 RPL23P62829 140 aaKnown RBP13.89□□□□□ -0.19
SCARB1-205ENST00000538291 ORMDL2Q53FV1 153 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 MTCL1Q9Y4B5 1905 aaKnown RBP13.89□□□□□ -0.19
SCARB1-205ENST00000538291 A0A087WX48 190 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 ADARB2-AS1A8MUL3 147 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 LILRA1O75019 489 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 C14orf144Q96I85 54 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 SDK2Q58EX2 2172 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 C17orf82Q86X59 251 aaPredicted RBP13.89□□□□□ -0.19
SCARB1-205ENST00000538291 A0A0G2JNJ9 132 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 ZNF688P0C7X2 276 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 RNF182Q8N6D2 247 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 Q9UFV3 132 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 TET1Q8NFU7 2136 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 IGHV1-3A0A0C4DH29 117 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 F2Z2F3 143 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 PPIFP30405 207 aaKnown RBP13.89□□□□□ -0.19
SCARB1-205ENST00000538291 CTAG1AP78358 180 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 SPSB3Q6PJ21 355 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 OSTCQ9NRP0 149 aa13.89□□□□□ -0.19
SCARB1-205ENST00000538291 ID3Q02535 119 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 KLRD1Q13241 179 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 ZNF362Q5T0B9 420 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-205ENST00000538291 OR10W1Q8NGF6 305 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 DMRT1Q9Y5R6 373 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 EFNA2O43921 213 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 SLC25A16P16260 332 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 IFITM2Q01629 132 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 EFNB3Q15768 340 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 GFI1BQ5VTD9 330 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 WDR83OSQ9Y284 106 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 SELLP14151 372 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 FAM19A2Q8N3H0 131 aa13.88□□□□□ -0.19
SCARB1-205ENST00000538291 M0R1W7 72 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 BRD3OSQ6XYD6 125 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 PRDM13Q9H4Q3 707 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 LOC285556D6RIA3 1793 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 HBDP02042 147 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■■■□ 20.4
SCARB1-205ENST00000538291 TMEM190Q8WZ59 177 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 PTPRFP10586 1907 aa13.87□□□□□ -0.19
SCARB1-205ENST00000538291 TMEM86BQ8N661 226 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 NABP1Q96AH0 204 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 IGKV1-12A0A0C4DH73 117 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 IGKV1D-12P01611 117 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 C10orf55Q5SWW7 151 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 PAQR4Q8N4S7 273 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-205ENST00000538291 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 ST6GALNAC6Q969X2 333 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 COQ2Q96H96 371 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 SSBP4Q9BWG4 385 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-205ENST00000538291 PLXNA1Q9UIW2 1896 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 PRR32B1ATL7 298 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 MBD3L4A6NDZ8 208 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-205ENST00000538291 MBD3L3A6NE82 208 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-205ENST00000538291 MBD3L5A6NJ08 208 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-205ENST00000538291 C1QTNF9P0C862 333 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 TEX38Q6PEX7 206 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 MBD3L2Q8NHZ7 208 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-205ENST00000538291 SSC4DQ8WTU2 575 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 RNF126Q9BV68 326 aa13.86□□□□□ -0.19
SCARB1-205ENST00000538291 LDLRAD4O15165 306 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 Q0VFX4 171 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 RCHY1Q96PM5 261 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 ACACAQ13085 2346 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 Q6ZS92 163 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 A0A1B0GWJ7 208 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
SCARB1-205ENST00000538291 DTX1Q86Y01 620 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 MSRB2Q9Y3D2 182 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 LINC01549A6NIU2 74 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 RNF114Q9Y508 228 aa13.85□□□□□ -0.19
SCARB1-205ENST00000538291 DPM2O94777 84 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 LINC01356Q8N9X3 169 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
SCARB1-205ENST00000538291 SPTBN1Q01082 2364 aaKnown RBP13.84□□□□□ -0.19
SCARB1-205ENST00000538291 A0A0A6YYD4 124 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 OTOFQ9HC10 1997 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 A0A087WV48 116 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 TRBV7-1A0A0A6YYK4 115 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 PLNP26678 52 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 RPL15P61313 204 aaKnown RBP13.84□□□□□ -0.19
SCARB1-205ENST00000538291 C21orf62-AS1Q17RA5 79 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 C5orf64Q2M2E5 130 aa13.84□□□□□ -0.19
SCARB1-205ENST00000538291 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.19
SCARB1-205ENST00000538291 MPZP25189 248 aa13.83□□□□□ -0.19
SCARB1-205ENST00000538291 MST1P26927 711 aa13.83□□□□□ -0.19
SCARB1-205ENST00000538291 CD177Q8N6Q3 437 aa13.83□□□□□ -0.19
SCARB1-205ENST00000538291 LINC00614P0C842 121 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 PSG1P11464 419 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 SLC25A48Q6ZT89 311 aaKnown RBP13.83□□□□□ -0.2
SCARB1-205ENST00000538291 NR2C2APQ86WQ0 139 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms