RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-210	ENST00000538129	TBC1D24	Q9ULP9	559 aa		4.56	□□□□□ -1.68
DDB1-210	ENST00000538129	F11R	Q9Y624	299 aa	Known RBP	4.56	□□□□□ -1.68
DDB1-210	ENST00000538129	TRAV6	A0A075B6T7	132 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	TRBV7-1	A0A0A6YYK4	115 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	PITX3	O75364	302 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	IFNA21	P01568	189 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	HLA-A	P01891	365 aa	Known RBP	4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	HTR2B	P41595	481 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	MFAP2	P55001	183 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	ATP5I	P56385	69 aa	Predicted RBP	4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	TATDN3	Q17R31	274 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	DEFB136	Q30KP8	78 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	PVRIG	Q6DKI7	326 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	NOXA1	Q86UR1	476 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	MITD1	Q8WV92	249 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	EEF1AKMT3	Q96AZ1	226 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	DUX3	Q96PT4	197 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	GPR61	Q9BZJ8	451 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	C20orf85	Q9H1P6	137 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	ENY2	Q9NPA8	101 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	NUDT15	Q9NV35	164 aa		4.55	□□□□□ -1.68
DDB1-210	ENST00000538129	IGHV4OR15-8	A0A075B7B6	117 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129		A0A087WW49	117 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	CEBPZOS	A8MTT3	80 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	USP17L23	D6RBM5	183 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	FAM90A26	D6RGX4	464 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	CORT	O00230	105 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	OVOL1	O14753	267 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	GGCT	O75223	188 aa	Known RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	MED6	O75586	246 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	IL5	P05113	134 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	HOXB5	P09067	269 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	HOXD3	P31249	432 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	FCGR2B	P31994	310 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	HOXA1	P49639	335 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	INSL3	P51460	131 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	TNFRSF9	Q07011	255 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	EXOSC2	Q13868	293 aa	Known RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	KLF5	Q13887	457 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	BSX	Q3C1V8	233 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	KPRP	Q5T749	579 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	GGNBP1	Q5YKI7	109 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	C19orf35	Q6ZS72	473 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	NRARP	Q7Z6K4	114 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	GPHB5	Q86YW7	130 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	OR1S1	Q8NH92	325 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	ZNF502	Q8TBZ5	544 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	ENKUR	Q8TC29	256 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	ZNF431	Q8TF32	576 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	SCARB1	Q8WTV0	552 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	DCUN1D4	Q92564	292 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	DLX4	Q92988	240 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	TXN2	Q99757	166 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	HIPK2	Q9H2X6	1198 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	ZMAT5	Q9UDW3	170 aa	Known RBP	4.54	□□□□□ -1.68
DDB1-210	ENST00000538129		U3KQ87	197 aa		4.54	□□□□□ -1.68
DDB1-210	ENST00000538129	MFSD2B	A6NFX1	497 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	SEC14L6	B5MCN3	397 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	INMT-MINDY4	F8WBC2	141 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129		I3L2K1	104 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129		K7EIM0	57 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	BMPR1B	O00238	502 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	PRAF2	O60831	178 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	TRBV12-3	P01733	135 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	RNASE2	P10153	161 aa	Known RBP	4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	IGLL1	P15814	213 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	CAMP	P49913	170 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	DEFA5	Q01523	94 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	RPEL1	Q2QD12	228 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	C2orf83	Q53S99	150 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	SPINK9	Q5DT21	86 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	SPSB3	Q6PJ21	355 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	PLET1	Q6UQ28	207 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	CLEC19A	Q6UXS0	136 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	CIB3	Q96Q77	187 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	MARVELD1	Q9BSK0	173 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	RBKS	Q9H477	322 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	GPN1	Q9HCN4	374 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	PALMD	Q9NP74	551 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	C21orf62	Q9NYP8	219 aa		4.53	□□□□□ -1.68
DDB1-210	ENST00000538129	CBY3	A6NI87	242 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	SNRPGP15	A8MWD9	76 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129		G3V4G9	280 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	LGALS9	O00182	355 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	TGOLN2	O43493	480 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	SYNGR2	O43760	224 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	ADAP1	O75689	374 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	MT-CO2	P00403	227 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	IGHV3-23	P01764	117 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	CTSG	P08311	255 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	NPBWR1	P48145	328 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	SYNJ2BP	P57105	145 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	EGFEM1P	Q0D2K5	195 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	FAM106A	Q4KMX7	169 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	C9orf66	Q5T8R8	295 aa		4.52	□□□□□ -1.69
DDB1-210	ENST00000538129	ETFRF1	Q6IPR1	90 aa		4.52	□□□□□ -1.69

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