RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ZNF414Q96IQ9 312 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 PRRT1Q99946 306 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 RTBDNQ9BSG5 229 aaPredicted RBP5.26□□□□□ -1.57
YBX3-206ENST00000536823 C5orf66Q9H5L9 145 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 NAA60Q9H7X0 242 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 SRD5A3Q9H8P0 318 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 GAR1Q9NY12 217 aaKnown RBP5.26□□□□□ -1.57
YBX3-206ENST00000536823 MRPL27Q9P0M9 148 aaKnown RBP5.26□□□□□ -1.57
YBX3-206ENST00000536823 SELENOKQ9Y6D0 94 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 CEPT1Q9Y6K0 416 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
YBX3-206ENST00000536823 LYSTQ99698 3801 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 TEX13DA0A0J9YY54 714 aaPredicted RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 RBMY1BA6NDE4 496 aaKnown RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 RBMY1EA6NEQ0 496 aaKnown RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 FABP12A6NFH5 140 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 C15orf62A8K5M9 175 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 OR11H12B2RN74 326 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 NUPL2O15504 423 aaKnown RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 TNFRSF6BO95407 300 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 CDS2O95674 445 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 IFNA17P01571 189 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 CTSGP08311 255 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 RBMY1DP0C7P1 496 aaKnown RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 RNASE2P10153 161 aaKnown RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 DHODHQ02127 395 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 RELQ04864 619 aaPredicted RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 ANKRD55Q3KP44 614 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 AARDQ4LEZ3 155 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 PVRIGQ6DKI7 326 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 OR52B4Q8NGK2 314 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 LHFPL5Q8TAF8 219 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 GLYATL2Q8WU03 294 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 TRIM63Q969Q1 353 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 TXN2Q99757 166 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 SPAG8Q99932 426 aaPredicted RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 PDCD10Q9BUL8 212 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 C20orf24Q9BUV8 137 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 RBM38Q9H0Z9 239 aaKnown RBP5.25□□□□□ -1.57
YBX3-206ENST00000536823 SCP2D1Q9UJQ7 156 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 GPR132Q9UNW8 380 aa5.25□□□□□ -1.57
YBX3-206ENST00000536823 IGHV3OR16-8A0A075B7F1 116 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 CCDC160A6NGH7 325 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 K7EMT4 169 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 CORTO00230 105 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 TSPAN4O14817 238 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 ZNF207O43670 478 aaKnown RBP5.24□□□□□ -1.57
YBX3-206ENST00000536823 GNG7O60262 68 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 IGHV3-48P01763 117 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 SNCAP37840 140 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 NPBWR1P48145 328 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 AP3S2P59780 193 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 SPCS3P61009 180 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 KLF9Q13886 244 aaPredicted RBP5.24□□□□□ -1.57
YBX3-206ENST00000536823 TMEM187Q14656 261 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 BSXQ3C1V8 233 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 TMEM268Q5VZI3 342 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 RBPMS2Q6ZRY4 209 aaKnown RBP5.24□□□□□ -1.57
YBX3-206ENST00000536823 SELENOHQ8IZQ5 122 aaKnown RBP5.24□□□□□ -1.57
YBX3-206ENST00000536823 IL22RA2Q969J5 263 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 TMEM230Q96A57 120 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 PINX1Q96BK5 328 aaKnown RBP5.24□□□□□ -1.57
YBX3-206ENST00000536823 GALNT14Q96FL9 552 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 OR10C1Q96KK4 312 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 SCGB3A2Q96PL1 93 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 HIPK2Q9H2X6 1198 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 RETNQ9HD89 108 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 ENY2Q9NPA8 101 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 MCUBQ9NWR8 336 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 CACNG5Q9UF02 275 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 V9GYH0 126 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 RYR3Q15413 4870 aa5.24□□□□□ -1.57
YBX3-206ENST00000536823 SACSQ9NZJ4 4579 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 IGHV7-4-1A0A0J9YVY3 117 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 ZNF701M0R085 212 aaPredicted RBP5.23□□□□□ -1.57
YBX3-206ENST00000536823 LYL1P12980 280 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 FAUP35544 74 aaKnown RBP5.23□□□□□ -1.57
YBX3-206ENST00000536823 ETV6P41212 452 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 SUB1P53999 127 aaKnown RBP eCLIP5.23□□□□□ -1.57
YBX3-206ENST00000536823 FOXI1Q12951 378 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 ZNF79Q15937 498 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 PYDC2Q56P42 97 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 FAM90A2PQ658T7 463 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 LAMTOR1Q6IAA8 161 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 ZNF600Q6ZNG1 722 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 Q6ZWC4 215 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 CCDC190Q86UF4 302 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 DUSP18Q8NEJ0 188 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 OR52E5Q8NH55 327 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 GPR146Q96CH1 333 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 GGTLC1Q9BX51 225 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 FNDC4Q9H6D8 234 aaPredicted RBP5.23□□□□□ -1.57
YBX3-206ENST00000536823 EDA2RQ9HAV5 297 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.23□□□□□ -1.57
YBX3-206ENST00000536823 SMPXQ9UHP9 88 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 TMEM56-RWDD3S4R434 201 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 ALMS1Q8TCU4 4167 aa5.23□□□□□ -1.57
YBX3-206ENST00000536823 A0A0B4J2A0 478 aa5.22□□□□□ -1.57
YBX3-206ENST00000536823 OR4C46A6NHA9 309 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms