RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 MIR17HGQ75NE6 70 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 FAM90A1Q86YD7 464 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 ABHD12Q8N2K0 398 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 OR13A1Q8NGR1 328 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 SLC25A40Q8TBP6 338 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 NEUROG1Q92886 237 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 IGF2BP2-AS1Q96M15 143 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 RCHY1Q96PM5 261 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 CLEC7AQ9BXN2 247 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 SEPSECSQ9HD40 501 aaKnown RBP6.36□□□□□ -1.39
CPSF7-216ENST00000536548 GCM1Q9NP62 436 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 GNG12Q9UBI6 72 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 PRNDQ9UKY0 176 aa6.36□□□□□ -1.39
CPSF7-216ENST00000536548 SOX21Q9Y651 276 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-216ENST00000536548 YLPM1P49750 1951 aaKnown RBP6.36□□□□□ -1.39
CPSF7-216ENST00000536548 SONP18583 2426 aaKnown RBP6.36□□□□□ -1.39
CPSF7-216ENST00000536548 IGHV3-43A0A0B4J1X8 118 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 H0YJW9 148 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 C15orf65H3BRN8 121 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 J3QR06 171 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 OR7C2O60412 319 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 SPINK4O60575 86 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 FOXH1O75593 365 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 OR5AL1P0C617 328 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 IGHV3-43DP0DP04 118 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 HIST1H1EP10412 219 aaKnown RBP6.35□□□□□ -1.39
CPSF7-216ENST00000536548 SSTR5P35346 364 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 TCL1AP56279 114 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 RHOGP84095 191 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 RBPJQ06330 500 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 FXYD3Q14802 87 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 POU2AF1Q16633 256 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 CR1LQ2VPA4 569 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 TMEM30BQ3MIR4 351 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 DOLPP1Q86YN1 238 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 PIP4P2Q8N4L2 257 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 GCSAMQ8N6F7 178 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 CHCHD1Q96BP2 118 aaKnown RBP6.35□□□□□ -1.39
CPSF7-216ENST00000536548 SMIM12Q96EX1 92 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 PMCHL2Q9BQD1 86 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 TMEM70Q9BUB7 260 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 WNT10AQ9GZT5 417 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 TMEM191AQ9H0A3 160 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 RNASE7Q9H1E1 156 aaKnown RBP6.35□□□□□ -1.39
CPSF7-216ENST00000536548 NCOR1P1Q9H4R4 102 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 ZNF257Q9Y2Q1 563 aa6.35□□□□□ -1.39
CPSF7-216ENST00000536548 CHD3Q12873 2000 aaKnown RBP6.35□□□□□ -1.39
CPSF7-216ENST00000536548 C3orf80F5H4A9 247 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 HAX1O00165 279 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 F2RL2O00254 374 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 MGST3O14880 152 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 ACTL6BO94805 426 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 IGLV2-8P01709 118 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 ARG2P78540 354 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 TNXAQ16473 311 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 Q56UQ5 140 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
CPSF7-216ENST00000536548 FAM19A2Q8N3H0 131 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 TMEM251Q8N6I4 163 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 OR1L4Q8NGR5 311 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 ZNF596Q8TC21 504 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 MBD6Q96DN6 1003 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 C1orf159Q96HA4 380 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 TTTY12Q9BZ98 90 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 MS4A6AQ9H2W1 248 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 TNFRSF19Q9NS68 423 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 TMEM14BQ9NUH8 114 aa6.34□□□□□ -1.39
CPSF7-216ENST00000536548 KLF13Q9Y2Y9 288 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-216ENST00000536548 LOC105371242A0A075B767 164 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 FAM90A27PA6NNH2 459 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 DEFB108AA8MXU0 73 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 GGTLC3B5MD39 225 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 K7ERU9 68 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 WNT9BO14905 357 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
CPSF7-216ENST00000536548 TIMM8AO60220 97 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-216ENST00000536548 HLA-DRB1P01911 266 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 FRMD6-AS1P0C7T7 363 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 IGLL1P15814 213 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 PRDX2P32119 198 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 MAGEA5P43359 124 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 MFAP2P55001 183 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 BPIFB3P59826 476 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 UBE2L3P68036 154 aaKnown RBP6.33□□□□□ -1.4
CPSF7-216ENST00000536548 PRCDQ00LT1 54 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 RNF151Q2KHN1 245 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 C2orf83Q53S99 150 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 OR4A47Q6IF82 309 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 SLC25A34Q6PIV7 304 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 WDR82Q6UXN9 313 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 C11orf53Q8IXP5 236 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 LYG1Q8N1E2 194 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 OR4F17Q8NGA8 305 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 RFESDQ8TAC1 157 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 Q8TCH9 128 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 CACNG8Q8WXS5 425 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 TMEM190Q8WZ59 177 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms