RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 TMEM128Q5BJH2 165 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 BTNL8Q6UX41 500 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 ZNF767PQ75MW2 155 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 SLC16A13Q7RTY0 426 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 OR4X1Q8NH49 305 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 MISP3Q96FF7 219 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 SRD5A3Q9H8P0 318 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 SMPXQ9UHP9 88 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 FLVCR2Q9UPI3 526 aa9.29□□□□□ -0.92
PRKDC-207ENST00000536483 IGHV3-35A0A0C4DH35 117 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 DUXBA0A1W2PPF3 345 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 OR11H12B2RN74 326 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 SLC25A6P12236 298 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 NKX2-5P52952 324 aaPredicted RBP9.28□□□□□ -0.92
PRKDC-207ENST00000536483 ATP5IP56385 69 aaPredicted RBP9.28□□□□□ -0.92
PRKDC-207ENST00000536483 IFITM2Q01629 132 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 LAMTOR1Q6IAA8 161 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 LGI3Q8N145 548 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 RNASEH2CQ8TDP1 164 aaKnown RBP9.28□□□□□ -0.92
PRKDC-207ENST00000536483 FNDC4Q9H6D8 234 aaPredicted RBP9.28□□□□□ -0.92
PRKDC-207ENST00000536483 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 HSPB7Q9UBY9 170 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 CACNG5Q9UF02 275 aa9.28□□□□□ -0.92
PRKDC-207ENST00000536483 IGHV7-4-1A0A0J9YVY3 117 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 A0A1B0GU03 582 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 GNG7O60262 68 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 PITX3O75364 302 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 CLN5O75503 358 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 CD5P06127 495 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 OR4E1P0C645 316 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 AKR1C4P17516 323 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 ANXA7P20073 488 aaKnown RBP9.27□□□□□ -0.93
PRKDC-207ENST00000536483 HOXA1P49639 335 aaPredicted RBP9.27□□□□□ -0.93
PRKDC-207ENST00000536483 SPINK9Q5DT21 86 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 RBPMS2Q6ZRY4 209 aaKnown RBP9.27□□□□□ -0.93
PRKDC-207ENST00000536483 UBAC2Q8NBM4 344 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 RNASE11Q8TAA1 199 aaKnown RBP9.27□□□□□ -0.93
PRKDC-207ENST00000536483 TMEM170AQ8WVE7 144 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 SELENOKQ9Y6D0 94 aa9.27□□□□□ -0.93
PRKDC-207ENST00000536483 HMSDA8MTL9 139 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 CHEK1O14757 476 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 CXCL3P19876 107 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 S100A1P23297 94 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 FGL1Q08830 312 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 SMCO1Q147U7 214 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 C4orf46Q504U0 113 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 FAM90A2PQ658T7 463 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 TOMM20LQ6UXN7 152 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 LYZL2Q7Z4W2 148 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 C12orf45Q8N5I9 185 aaPredicted RBP9.26□□□□□ -0.93
PRKDC-207ENST00000536483 TMEM116Q8NCL8 245 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 OR52B4Q8NGK2 314 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 PINX1Q96BK5 328 aaKnown RBP9.26□□□□□ -0.93
PRKDC-207ENST00000536483 SEC22CQ9BRL7 303 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 VSIRQ9H7M9 311 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 U3KQ87 197 aa9.26□□□□□ -0.93
PRKDC-207ENST00000536483 TRAV30A0A087WSZ9 112 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 TRAV14DV4A0A0A6YYC5 116 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 ATP6V1G1O75348 118 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
PRKDC-207ENST00000536483 IGKV1-17P01599 117 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 SLC25A4P12235 298 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 TNFRSF9Q07011 255 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 OR2T35Q8NGX2 323 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 C20orf24Q9BUV8 137 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 RHPN1-AS1Q9BWJ2 59 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 HEYLQ9NQ87 328 aaPredicted RBP9.25□□□□□ -0.93
PRKDC-207ENST00000536483 MRPL36Q9P0J6 103 aaKnown RBP9.25□□□□□ -0.93
PRKDC-207ENST00000536483 HSPB11Q9Y547 144 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
PRKDC-207ENST00000536483 RPS10-NUDT3A0A1W2PQS6 291 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 IGHV3-48P01763 117 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 CYCSP99999 105 aaKnown RBP9.24□□□□□ -0.93
PRKDC-207ENST00000536483 MLANAQ16655 118 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 PRSS54Q6PEW0 395 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 LYG2Q86SG7 212 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 SLC24A4Q8NFF2 622 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 MITD1Q8WV92 249 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 RNF2Q99496 336 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 TMED3Q9Y3Q3 217 aa9.24□□□□□ -0.93
PRKDC-207ENST00000536483 TRAV2A0A0B4J234 112 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 OR4C46A6NHA9 309 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 CEBPZOSA8MTT3 80 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 FAM90A26D6RGX4 464 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 SCGB2A1O75556 95 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 YIF1AO95070 293 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 SFT2D2O95562 160 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 CRYBB3P26998 211 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 BMI1P35226 326 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 OPRK1P41145 380 aa9.23□□□□□ -0.93
PRKDC-207ENST00000536483 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
PRKDC-207ENST00000536483 YPEL3P61236 119 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms