RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 SDCBPO00560 298 aaPredicted RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 FCN1O00602 326 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TNFSF12O43508 249 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SPRY1O43609 319 aaPredicted RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 HSBP1O75506 76 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR2J3O76001 311 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SNCGO76070 127 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 APOMO95445 188 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TIMP1P01033 207 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 IGHV3-7P01780 117 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 HLA-DQA1P01909 254 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SLC25A5P05141 298 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 SCTP09683 121 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 H2BFMP0C1H6 154 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 LINC00694P0DN24 101 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 RPL7P18124 248 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 BLVRBP30043 206 aaPredicted RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 PTGDSP41222 190 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 EFNB2P52799 333 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 XGP55808 180 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 FXYD6P3P58550 94 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 RPS24P62847 133 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 SP4Q02446 784 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ZNF90Q03938 601 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 CXCL9Q07325 125 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TAF10Q12962 218 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 HSPB3Q12988 150 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 KLF5Q13887 457 aaPredicted RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 IHHQ14623 411 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 MRPL23Q16540 153 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 POM121L1PQ3SYA9 428 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ETDBQ3ZM63 59 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 Q56UQ5 140 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 C1orf100Q5SVJ3 147 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TEX36Q5VZQ5 186 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SIGLEC15Q6ZMC9 328 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TMEM136Q6ZRR5 245 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 Q6ZS49 121 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ASCL5Q7RTU5 278 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TRAPPC6BQ86SZ2 158 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ZNF695Q8IW36 515 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ATOH7Q8N100 152 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 DEFB106AQ8N104 65 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 NPWQ8N729 165 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 LINC01555Q8NAE3 123 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 VN1R2Q8NFZ6 395 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR11H6Q8NGC7 330 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR1L8Q8NGR8 309 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR10J6PQ8NGY7 276 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR51H1Q8NH63 302 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR9G1Q8NH87 305 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 LMX1AQ8TE12 382 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 PPDPFLQ8WWR9 84 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR5P2Q8WZ92 322 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 FGF13Q92913 245 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SNRNP40Q96DI7 357 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 NEURL3Q96EH8 262 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ADAT3Q96EY9 351 aaPredicted RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 PRAC1Q96KF2 57 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 AMELYQ99218 206 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 HSD17B10Q99714 261 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 PDCD1LG2Q9BQ51 273 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR2H1Q9GZK4 316 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SIRPDQ9H106 197 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 DEFB129Q9H1M3 183 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 LINC00597Q9H2U6 94 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 C11orf1Q9H5F2 150 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ZNF665Q9H7R5 613 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 NAA60Q9H7X0 242 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ELOVL3Q9HB03 270 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 SLC39A9Q9NUM3 307 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 HRASLS2Q9NWW9 162 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 IL36BQ9NZH7 164 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 CKLFQ9UBR5 152 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TRMT112Q9UI30 125 aaKnown RBP1.97□□□□□ -2.09
SKA3-207ENST00000536239 CES1P1Q9UKY3 287 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ZNF835Q9Y2P0 537 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 OR1A2Q9Y585 309 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 INSIG2Q9Y5U4 225 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 KCNE3Q9Y6H6 103 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 LY96Q9Y6Y9 160 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 GTF3C1Q12789 2109 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TRPM6Q9BX84 2022 aa1.96□□□□□ -2.09
SKA3-207ENST00000536239 ZNF831Q5JPB2 1677 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 EXPH5Q8NEV8 1989 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 PTPRDP23468 1912 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 A0A087WW49 117 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 TRAV24A0A0B4J272 114 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 ZNF816-ZNF321PA0A0X1KG74 233 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 C5orf49A4QMS7 147 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 CRYM-AS1A6NIL9 109 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 SNURFLB1AK76 121 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 HMGN4O00479 90 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 TNFSF11O14788 317 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 NPFFO15130 113 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 NBR2O15453 112 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 NDUFS4O43181 175 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 APCSP02743 223 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 LGALS2P05162 132 aa1.96□□□□□ -2.1
SKA3-207ENST00000536239 MRPL3P09001 348 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms