RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
DDX55-204ENST00000536079 PSENENQ9NZ42 101 aa13.48□□□□□ -0.25
DDX55-204ENST00000536079 PUS1Q9Y606 427 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDX55-204ENST00000536079 IGKV1D-37A0A075B6S9 117 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 PMS2P5A8MQ11 134 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 SNRPGP15A8MWD9 76 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 K7EMT4 169 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 K7EPK0 472 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 PRAF2O60831 178 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 APOHP02749 345 aaPredicted RBP13.47□□□□□ -0.25
DDX55-204ENST00000536079 OR10J1P30954 320 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 ATP5IP56385 69 aaPredicted RBP13.47□□□□□ -0.25
DDX55-204ENST00000536079 DEFB121Q5J5C9 76 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 Q8N1Y9 231 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 SMIM8Q96KF7 97 aa13.47□□□□□ -0.25
DDX55-204ENST00000536079 DAZ1Q9NQZ3 744 aaKnown RBP13.47□□□□□ -0.25
DDX55-204ENST00000536079 MRPL27Q9P0M9 148 aaKnown RBP13.47□□□□□ -0.25
DDX55-204ENST00000536079 ZMAT5Q9UDW3 170 aaKnown RBP13.47□□□□□ -0.25
DDX55-204ENST00000536079 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.25
DDX55-204ENST00000536079 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.25
DDX55-204ENST00000536079 GOSR2O14653 212 aa13.46□□□□□ -0.25
DDX55-204ENST00000536079 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.25
DDX55-204ENST00000536079 ETFRF1Q6IPR1 90 aa13.46□□□□□ -0.25
DDX55-204ENST00000536079 TMEM61Q8N0U2 210 aa13.46□□□□□ -0.25
DDX55-204ENST00000536079 LILRB2Q8N423 598 aa13.46□□□□□ -0.25
DDX55-204ENST00000536079 TECRQ9NZ01 308 aaKnown RBP13.46□□□□□ -0.25
DDX55-204ENST00000536079 STRAPQ9Y3F4 350 aaKnown RBP13.46□□□□□ -0.25
DDX55-204ENST00000536079 LSM5Q9Y4Y9 91 aaKnown RBP13.46□□□□□ -0.25
DDX55-204ENST00000536079 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 C7orf66A4D0T2 115 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 RAB11AP62491 216 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 LCN12Q6JVE5 192 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 GSG1LQ6UXU4 331 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 OR1S2Q8NGQ3 325 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 SMPXQ9UHP9 88 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 SORL1Q92673 2214 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 DNAH9Q9NYC9 4486 aa13.45□□□□□ -0.26
DDX55-204ENST00000536079 IGHV7-4-1A0A0J9YVY3 117 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 CHEK1O14757 476 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 SCAF4O95104 1147 aaKnown RBP13.44□□□□□ -0.26
DDX55-204ENST00000536079 PTTG1O95997 202 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 RPP30P78346 268 aaKnown RBP13.44□□□□□ -0.26
DDX55-204ENST00000536079 ZNF90Q03938 601 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 ARL16Q0P5N6 197 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 RAB32Q13637 225 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 TMEM14EPQ6UXP3 125 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 OR2K2Q8NGT1 345 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 MARC2Q969Z3 335 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 RAB40CQ96S21 281 aa13.44□□□□□ -0.26
DDX55-204ENST00000536079 TRAV30A0A087WSZ9 112 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 IGHV3-66A0A0C4DH42 116 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 METTL15P1P0C7V9 234 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 H2BFSP57053 126 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 YPEL3P61236 119 aaPredicted RBP13.43□□□□□ -0.26
DDX55-204ENST00000536079 OR8G2PQ6IF36 304 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 SLC35E1Q96K37 410 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 RNF2Q99496 336 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 RHPN1-AS1Q9BWJ2 59 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 ALG5Q9Y673 324 aa13.43□□□□□ -0.26
DDX55-204ENST00000536079 TRAV14DV4A0A0A6YYC5 116 aa13.42□□□□□ -0.26
DDX55-204ENST00000536079 CD7P09564 240 aa13.42□□□□□ -0.26
DDX55-204ENST00000536079 TAS2R30P59541 319 aa13.42□□□□□ -0.26
DDX55-204ENST00000536079 GUCA2BQ16661 112 aa13.42□□□□□ -0.26
DDX55-204ENST00000536079 ACOT7LQ6ZUV0 252 aa13.42□□□□□ -0.26
DDX55-204ENST00000536079 ST8SIA2Q92186 375 aa13.42□□□□□ -0.26
DDX55-204ENST00000536079 FAM24AA6NFZ4 105 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 TSC22D2O75157 780 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 TOMM40O96008 361 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 PSG1P11464 419 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 S100A10P60903 97 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 RRAS2P62070 204 aaPredicted RBP13.41□□□□□ -0.26
DDX55-204ENST00000536079 USF2Q15853 346 aaPredicted RBP13.41□□□□□ -0.26
DDX55-204ENST00000536079 TMEM182Q6ZP80 229 aaPredicted RBP13.41□□□□□ -0.26
DDX55-204ENST00000536079 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 WFDC10AQ9H1F0 79 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
DDX55-204ENST00000536079 ZFP92A6NM28 416 aa13.4□□□□□ -0.26
DDX55-204ENST00000536079 SSNA1O43805 119 aa13.4□□□□□ -0.26
DDX55-204ENST00000536079 RD3LP0DJH9 198 aa13.4□□□□□ -0.26
DDX55-204ENST00000536079 FAM90A2PQ658T7 463 aa13.4□□□□□ -0.26
DDX55-204ENST00000536079 TGP01266 2768 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 H0YIZ8 118 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 L7N2F9 121 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 IL4P05112 153 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 CRYBB3P26998 211 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 VAMP2P63027 116 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 DCTN2Q13561 401 aaKnown RBP13.39□□□□□ -0.27
DDX55-204ENST00000536079 OR2F1Q13607 317 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 OR51G1Q8NGK1 321 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 Q8WTZ3 238 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 GINS3Q9BRX5 216 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 U3KQE9 123 aa13.39□□□□□ -0.27
DDX55-204ENST00000536079 IGSF23A1L1A6 192 aa13.38□□□□□ -0.27
DDX55-204ENST00000536079 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
DDX55-204ENST00000536079 NPPCP23582 126 aa13.38□□□□□ -0.27
DDX55-204ENST00000536079 GATA2P23769 480 aaPredicted RBP13.38□□□□□ -0.27
DDX55-204ENST00000536079 BCAP31P51572 246 aa13.38□□□□□ -0.27
DDX55-204ENST00000536079 CD81P60033 236 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms