RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 GPR146Q96CH1 333 aa7.97□□□□□ -1.13
CCDC60-202ENST00000535685 C6orf62Q9GZU0 229 aaPredicted RBP7.97□□□□□ -1.13
CCDC60-202ENST00000535685 MAP6D1Q9H9H5 199 aa7.97□□□□□ -1.13
CCDC60-202ENST00000535685 UBQLN2Q9UHD9 624 aa7.97□□□□□ -1.13
CCDC60-202ENST00000535685 KCNIP3Q9Y2W7 256 aa7.97□□□□□ -1.13
CCDC60-202ENST00000535685 PUS1Q9Y606 427 aaKnown RBP eCLIP7.97□□□□□ -1.13
CCDC60-202ENST00000535685 PIGBOS1A0A0B4J2F0 54 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 A0A1B0GU03 582 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 RPS10-NUDT3A0A1W2PQS6 291 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 A0A1W2PS18 150 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 SCGB2A1O75556 95 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 SLC25A4P12235 298 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 CRYBB3P26998 211 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 TNFSF8P32971 234 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM187Q14656 261 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 ODF1Q14990 250 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 NMSQ5H8A3 153 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 TCF24Q7RTU0 167 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 NOXA1Q86UR1 476 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 RNASE11Q8TAA1 199 aaKnown RBP7.96□□□□□ -1.14
CCDC60-202ENST00000535685 DEDD2Q8WXF8 326 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM230Q96A57 120 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM231Q9H6L2 316 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 MRPL36Q9P0J6 103 aaKnown RBP7.96□□□□□ -1.14
CCDC60-202ENST00000535685 CACNG5Q9UF02 275 aa7.96□□□□□ -1.14
CCDC60-202ENST00000535685 A0A0B4J2A0 478 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 FABP12A6NFH5 140 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 NOL3O60936 208 aaKnown RBP7.95□□□□□ -1.14
CCDC60-202ENST00000535685 JTBO76095 146 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 NPPCP23582 126 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 OPRK1P41145 380 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 ATP5IP56385 69 aaPredicted RBP7.95□□□□□ -1.14
CCDC60-202ENST00000535685 YPEL3P61236 119 aaPredicted RBP7.95□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM268Q5VZI3 342 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 GATAD1Q8WUU5 269 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 CSTL1Q9H114 145 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 SHPKQ9UHJ6 478 aa7.95□□□□□ -1.14
CCDC60-202ENST00000535685 IGHV3-49A0A0A0MS15 119 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 APOHP02749 345 aaPredicted RBP7.94□□□□□ -1.14
CCDC60-202ENST00000535685 IGLC1P0CG04 106 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 SULT1A3P0DMM9 295 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 SULT1A4P0DMN0 295 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 CCR6P51684 374 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 SUPT4H1P63272 117 aaKnown RBP7.94□□□□□ -1.14
CCDC60-202ENST00000535685 SRPXP78539 464 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 MLANAQ16655 118 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 DEFB135Q30KP9 77 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 CT83Q5H943 113 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 TOR2AQ5JU69 321 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 ETFRF1Q6IPR1 90 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 PRSS54Q6PEW0 395 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 LYG2Q86SG7 212 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 SLC24A4Q8NFF2 622 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 OR1S2Q8NGQ3 325 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 MCFD2Q8NI22 146 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM170AQ8WVE7 144 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 METTL26Q96S19 204 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 MS4A6AQ9H2W1 248 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 HEYLQ9NQ87 328 aaPredicted RBP7.94□□□□□ -1.14
CCDC60-202ENST00000535685 U3KQ87 197 aa7.94□□□□□ -1.14
CCDC60-202ENST00000535685 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 IGHV3OR16-13A0A075B7E8 117 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 IGHV3-74A0A0B4J1X5 117 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 A0A0J9YWU9 116 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 DUXBA0A1W2PPF3 345 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 MPTX1A8MV57 137 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 RPL35AP18077 110 aaKnown RBP7.93□□□□□ -1.14
CCDC60-202ENST00000535685 FAUP35544 74 aaKnown RBP7.93□□□□□ -1.14
CCDC60-202ENST00000535685 AP3S2P59780 193 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 KLF9Q13886 244 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-202ENST00000535685 APRG1Q8IVJ8 170 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 TMEM217Q8N7C4 229 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 TRIM63Q969Q1 353 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 HSPB7Q9UBY9 170 aa7.93□□□□□ -1.14
CCDC60-202ENST00000535685 CEBPZOSA8MTT3 80 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 K7EQG2 157 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 DNASE2O00115 360 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-202ENST00000535685 ANXA3P12429 323 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 NPY1RP25929 384 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 P2RY1P47900 373 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 SMCO1Q147U7 214 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 TIGITQ495A1 244 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 LGI3Q8N145 548 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 GBGT1Q8N5D6 347 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 LRTM2Q8N967 370 aa7.92□□□□□ -1.14
CCDC60-202ENST00000535685 NARS2Q96I59 477 aaKnown RBP7.92□□□□□ -1.14
CCDC60-202ENST00000535685 SEPSECSQ9HD40 501 aaKnown RBP7.92□□□□□ -1.14
CCDC60-202ENST00000535685 NUPR2A6NF83 97 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 ZNF701M0R085 212 aaPredicted RBP7.91□□□□□ -1.14
CCDC60-202ENST00000535685 PITX3O75364 302 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 SLC25A6P12236 298 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 OR10J1P30954 320 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 TFPI2P48307 235 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 RND2P52198 227 aa7.91□□□□□ -1.14
CCDC60-202ENST00000535685 EWSR1Q01844 656 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC60-202ENST00000535685 ZNF124Q15973 351 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms