RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 ZNF124Q15973 351 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 TIGITQ495A1 244 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 PYDC2Q56P42 97 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 SPANXN2Q5MJ10 180 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 TOMM5Q8N4H5 51 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 IL17DQ8TAD2 202 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 DEDD2Q8WXF8 326 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 MS4A6AQ9H2W1 248 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 MAP6D1Q9H9H5 199 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 BATF3Q9NR55 127 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 KIAA1109Q2LD37 5005 aa10.37□□□□□ -0.75
SF3B2-215ENST00000534307 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 TRAV2A0A0B4J234 112 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 NXPH3O95157 252 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 SLC25A4P12235 298 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 NPPCP23582 126 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 NPY1RP25929 384 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 TFPI2P48307 235 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 CMC4P56277 68 aaPredicted RBP10.36□□□□□ -0.75
SF3B2-215ENST00000534307 SRPXP78539 464 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 SMCO1Q147U7 214 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 DEFB135Q30KP9 77 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 LGI3Q8N145 548 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
SF3B2-215ENST00000534307 TRAV30A0A087WSZ9 112 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 SPRY2O43597 315 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 PITX3O75364 302 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 SCGB2A1O75556 95 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 ANXA3P12429 323 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 RPL35AP18077 110 aaKnown RBP10.35□□□□□ -0.75
SF3B2-215ENST00000534307 RND2P52198 227 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 PAFAH1B2P68402 229 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 BAK1Q16611 211 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 TMEM128Q5BJH2 165 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 LINC00299Q6ZSB3 139 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 LRTM2Q8N967 370 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 RNF183Q96D59 192 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 SLC25A21Q9BQT8 299 aaPredicted RBP10.35□□□□□ -0.75
SF3B2-215ENST00000534307 U3KQE9 123 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
SF3B2-215ENST00000534307 DUXBA0A1W2PPF3 345 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 OR10J1P30954 320 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
SF3B2-215ENST00000534307 EWSR1Q01844 656 aaKnown RBP eCLIP10.34□□□□□ -0.75
SF3B2-215ENST00000534307 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 OR1S2Q8NGQ3 325 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 DTD1Q8TEA8 209 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 METTL26Q96S19 204 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 RBKSQ9H477 322 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 TMEM231Q9H6L2 316 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 U3KQ87 197 aa10.34□□□□□ -0.75
SF3B2-215ENST00000534307 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 A0A1W2PS18 150 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 A6NHS1 94 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 P2RY1P47900 373 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 ETFRF1Q6IPR1 90 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 NOXA1Q86UR1 476 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 NPIPB3Q92617 1050 aa10.33□□□□□ -0.76
SF3B2-215ENST00000534307 K7EQG2 157 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 IFNA10P01566 189 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 SLC25A6P12236 298 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-215ENST00000534307 ATP5IP56385 69 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-215ENST00000534307 PPP1R1AQ13522 171 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 RBMS2Q15434 407 aaKnown RBP10.32□□□□□ -0.76
SF3B2-215ENST00000534307 USF2Q15853 346 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-215ENST00000534307 LYG2Q86SG7 212 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 Q8WTZ3 238 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 GLMPQ8WWB7 406 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
SF3B2-215ENST00000534307 DNASE2O00115 360 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-215ENST00000534307 SFT2D2O95562 160 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 VAMP1P23763 118 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 BTCP35070 178 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 DEFB131AP59861 70 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
SF3B2-215ENST00000534307 OR1S1Q8NH92 325 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 ACY3Q96HD9 319 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 GRAMD2BQ96HH9 432 aa10.31□□□□□ -0.76
SF3B2-215ENST00000534307 IGKV1D-37A0A075B6S9 117 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 MPTX1A8MV57 137 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 JTBO76095 146 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 TOMM40O96008 361 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 HNRNPCP07910 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
SF3B2-215ENST00000534307 LEMD1Q68G75 181 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 C16orf54Q6UWD8 224 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 NARS2Q96I59 477 aaKnown RBP10.3□□□□□ -0.76
SF3B2-215ENST00000534307 RABAC1Q9UI14 185 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 TMED3Q9Y3Q3 217 aa10.3□□□□□ -0.76
SF3B2-215ENST00000534307 FAM90A26D6RGX4 464 aa10.29□□□□□ -0.76
SF3B2-215ENST00000534307 IL4P05112 153 aa10.29□□□□□ -0.76
SF3B2-215ENST00000534307 RD3LP0DJH9 198 aa10.29□□□□□ -0.76
SF3B2-215ENST00000534307 PSG1P11464 419 aa10.29□□□□□ -0.76
SF3B2-215ENST00000534307 GPX4P36969 197 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms