RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 MISP3Q96FF7 219 aa7.89□□□□□ -1.15
LDLRAD3-206ENST00000534091 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
LDLRAD3-206ENST00000534091 TRGV9Q99603 122 aa7.89□□□□□ -1.15
LDLRAD3-206ENST00000534091 THYN1Q9P016 225 aa7.89□□□□□ -1.15
LDLRAD3-206ENST00000534091 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 SEC14L6B5MCN3 397 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 K7EIM0 57 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 APELAP0DMC3 54 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 DEFA4P12838 97 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 S100A1P23297 94 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 FCGR2BP31994 310 aaPredicted RBP7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 FHITP49789 147 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 RND2P52198 227 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 ELLP55199 621 aaPredicted RBP7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 RAB2AP61019 212 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 B2MP61769 119 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 SELENOTP62341 195 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 ZNF616Q08AN1 781 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 LY6EQ16553 131 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 MLANAQ16655 118 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 PRR31Q5SQ13 230 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 UQCC3Q6UW78 93 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 UNQ5815/PRO19632Q6UWF5 114 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 STPG3Q8N7X2 389 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR4X1Q8NH49 305 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR2T6Q8NHC8 308 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 MARC2Q969Z3 335 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 NPFFR1Q9GZQ6 430 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 VSIRQ9H7M9 311 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 SLC39A9Q9NUM3 307 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 PXMP4Q9Y6I8 212 aa7.88□□□□□ -1.15
LDLRAD3-206ENST00000534091 IGKV1D-37A0A075B6S9 117 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 TCRBV4S1A1TA0A5B7 111 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 TEX46H3BTG2 121 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 H3BUA1 57 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 YIF1AO95070 293 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR10J1P30954 320 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 PROK1P58294 105 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 PMS2P11Q13670 270 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 ZNF726P1Q15940 193 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 ECSCRQ19T08 205 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 MIC13Q5XKP0 118 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 SPSB3Q6PJ21 355 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 C19orf35Q6ZS72 473 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 CYP2G1PQ6ZSU1 146 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 LINC01006Q8NI28 216 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 VN1R17PQ8TDU5 208 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 NPIPB3Q92617 1050 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 ACY3Q96HD9 319 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 CITED1Q99966 193 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 ACTR3CQ9C0K3 210 aaPredicted RBP7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 HRH4Q9H3N8 390 aa7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 MRPL36Q9P0J6 103 aaKnown RBP7.87□□□□□ -1.15
LDLRAD3-206ENST00000534091 TRAV30A0A087WSZ9 112 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 TRBV9A0A0B4J1U6 114 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 TRAV41A0A0B4J266 112 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 AP4M1O00189 453 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 CLN5O75503 358 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 LINC00869P0C866 280 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 IGLC1P0CG04 106 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 CDC34P49427 236 aaPredicted RBP7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 Q6ZSV7 163 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 SLC35E3Q7Z769 313 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 Q8N2B8 174 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 RPP25LQ8N5L8 163 aaKnown RBP7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR10G4Q8NGN3 311 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR10G9Q8NGN4 311 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR10G7Q8NGN6 311 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 ATP6V0BQ99437 205 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 RNF2Q99496 336 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 TXN2Q99757 166 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 TNFRSF19Q9NS68 423 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 ANK2Q01484 3957 aa7.86□□□□□ -1.15
LDLRAD3-206ENST00000534091 PSMB11A5LHX3 300 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 MAP1LC3B2A6NCE7 125 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 SH2D7A6NKC9 451 aaPredicted RBP7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 ZFP92A6NM28 416 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 LINC01548A6NM66 108 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 NPBWR1P48145 328 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 MFAP4P55083 255 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 PLP1P60201 277 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 BPIFCQ8NFQ6 507 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR5T1Q8NG75 326 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 MAP1LC3BQ9GZQ8 125 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 SMDT1Q9H4I9 107 aa7.85□□□□□ -1.15
LDLRAD3-206ENST00000534091 G3V318 75 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 M0QZ24 198 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 NDUFS6O75380 124 aaKnown RBP7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 SCGB2A1O75556 95 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 FABP1P07148 127 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 OR5G3P0C626 314 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 PPIFP30405 207 aaKnown RBP7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 RHOBP62745 196 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 BLCAPP62952 87 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 CFHR3Q02985 330 aa7.84□□□□□ -1.15
LDLRAD3-206ENST00000534091 C9orf152Q5JTZ5 239 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms