RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 TAS2R31P59538 309 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 S100A12P80511 92 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 FHL2Q14192 279 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 P2RY14Q15391 338 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 POU2AF1Q16633 256 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 OR1P1Q8NH06 330 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 RXFP4Q8TDU9 374 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
CD44-237ENST00000534082 PINX1Q96BK5 328 aaKnown RBP4.37□□□□□ -1.71
CD44-237ENST00000534082 MOB3AQ96BX8 217 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 NARS2Q96I59 477 aaKnown RBP4.37□□□□□ -1.71
CD44-237ENST00000534082 TMEM208Q9BTX3 173 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 WDR12Q9GZL7 423 aaKnown RBP4.37□□□□□ -1.71
CD44-237ENST00000534082 NDUFA4L2Q9NRX3 87 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 IGKV1D-8A0A087WSZ0 117 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 A0A0J9YY99 117 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 ZNF561-AS1K7EIQ3 104 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 M0QYG6 137 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 RS1O15537 224 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 RBFOX2O43251 390 aaKnown RBP eCLIP4.36□□□□□ -1.71
CD44-237ENST00000534082 TNFSF12O43508 249 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 CIDEAO60543 219 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 C1QBP02746 253 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 NQO2P16083 231 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 M6PRP20645 277 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 NFYAP23511 347 aaPredicted RBP4.36□□□□□ -1.71
CD44-237ENST00000534082 PPP5CP53041 499 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 FCN2Q15485 313 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 Q6ZSA8 131 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 AMIGO2Q86SJ2 522 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 STX12Q86Y82 276 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 PQLC1Q8N2U9 271 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 DMBX1Q8NFW5 382 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 OR4B1Q8NGF8 309 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 OR56B1Q8NGI3 324 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 GLMPQ8WWB7 406 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 TRIM63Q969Q1 353 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 SAV1Q9H4B6 383 aaPredicted RBP4.36□□□□□ -1.71
CD44-237ENST00000534082 SEPSECSQ9HD40 501 aaKnown RBP4.36□□□□□ -1.71
CD44-237ENST00000534082 FGF20Q9NP95 211 aaPredicted RBP4.36□□□□□ -1.71
CD44-237ENST00000534082 NRN1Q9NPD7 142 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 FAM212BQ9NTI7 297 aaPredicted RBP4.36□□□□□ -1.71
CD44-237ENST00000534082 MRPS18AQ9NVS2 196 aaKnown RBP4.36□□□□□ -1.71
CD44-237ENST00000534082 NDUFA13Q9P0J0 144 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 KCNK7Q9Y2U2 307 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 ARL2BPQ9Y2Y0 163 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 LPAP08519 4548 aa4.36□□□□□ -1.71
CD44-237ENST00000534082 PLAC8L1A1L4L8 177 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 ZNF705GA8MUZ8 300 aaPredicted RBP4.35□□□□□ -1.71
CD44-237ENST00000534082 SULT1C2O00338 296 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 PRM2P04554 102 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 HTR2BP41595 481 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 NPBWR1P48145 328 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 PCP4P48539 62 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 RASSF2P50749 326 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 AP2S1P53680 142 aaPredicted RBP4.35□□□□□ -1.71
CD44-237ENST00000534082 PSG9Q00887 426 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 ST3GAL4Q11206 333 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 OR5I1Q13606 314 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 INSL4Q14641 139 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 FOXI2Q6ZQN5 318 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 Q6ZS49 121 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 RAB3CQ96E17 227 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 TMEM56Q96MV1 263 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 NSG2Q9Y328 171 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 OR51B2Q9Y5P1 312 aa4.35□□□□□ -1.71
CD44-237ENST00000534082 A0A075B6Q4 140 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 A0A1B0GVG6 124 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 HSBP1L1C9JCN9 74 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 MFNGO00587 321 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 DENRO43583 198 aaKnown RBP4.34□□□□□ -1.71
CD44-237ENST00000534082 PFDN1O60925 122 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 NOL3O60936 208 aaKnown RBP4.34□□□□□ -1.71
CD44-237ENST00000534082 NXPH4O95158 308 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 HPRT1P00492 218 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 MYL12AP19105 171 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 TSPOP30536 169 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 TALDO1P37837 337 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.71
CD44-237ENST00000534082 RORCP51449 518 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 ERVK-16P61578 105 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 ZNF79Q15937 498 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 ZNF674Q2M3X9 581 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 ZIK1Q3SY52 487 aaPredicted RBP4.34□□□□□ -1.71
CD44-237ENST00000534082 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 ZNF680Q8NEM1 530 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 OR13F1Q8NGS4 319 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 RHOXF1Q8NHV9 184 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 PHYHIPQ92561 330 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 IGF2BP2-AS1Q96M15 143 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 LINC00052Q96N35 136 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 PLGRKTQ9HBL7 147 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 COMMD9Q9P000 198 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 CLEC2DQ9UHP7 191 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 POMPQ9Y244 141 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 ORC6Q9Y5N6 252 aa4.34□□□□□ -1.71
CD44-237ENST00000534082 MARCH11A6NNE9 402 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms