RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 FXYD6-FXYD2A0A087WZ82 144 aa13.39□□□□□ -0.27
NXF1-216ENST00000533499 TRAV14DV4A0A0A6YYC5 116 aa13.39□□□□□ -0.27
NXF1-216ENST00000533499 A0A1B0GVG6 124 aa13.39□□□□□ -0.27
NXF1-216ENST00000533499 PMS2P5A8MQ11 134 aa13.39□□□□□ -0.27
NXF1-216ENST00000533499 NUP62P37198 522 aaPredicted RBP13.39□□□□□ -0.27
NXF1-216ENST00000533499 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.27
NXF1-216ENST00000533499 TREML4Q6UXN2 200 aa13.39□□□□□ -0.27
NXF1-216ENST00000533499 PRSS46E5RG02 174 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 RPL12P30050 165 aaKnown RBP13.38□□□□□ -0.27
NXF1-216ENST00000533499 FCGR2BP31994 310 aaPredicted RBP13.38□□□□□ -0.27
NXF1-216ENST00000533499 HBG1P69891 147 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 HBG2P69892 147 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 DLK1P80370 383 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 NHLH2Q02577 135 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 RELQ04864 619 aaPredicted RBP13.38□□□□□ -0.27
NXF1-216ENST00000533499 C1QL4Q86Z23 238 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 OR1S2Q8NGQ3 325 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
NXF1-216ENST00000533499 ZNF207O43670 478 aaKnown RBP13.37□□□□□ -0.27
NXF1-216ENST00000533499 OR2F1Q13607 317 aa13.37□□□□□ -0.27
NXF1-216ENST00000533499 KLF5Q13887 457 aaPredicted RBP13.37□□□□□ -0.27
NXF1-216ENST00000533499 SMIM3Q9BZL3 60 aa13.37□□□□□ -0.27
NXF1-216ENST00000533499 SEC14L6B5MCN3 397 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 SCAF4O95104 1147 aaKnown RBP13.36□□□□□ -0.27
NXF1-216ENST00000533499 IGLC1P0CG04 106 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 S100A11P31949 105 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 CLINT1Q14677 625 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 UNQ9165/PRO28630Q6UXU0 137 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 GPHB5Q86YW7 130 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 OR5C1Q8NGR4 320 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 ELOVL1Q9BW60 279 aa13.36□□□□□ -0.27
NXF1-216ENST00000533499 UBE2L5PA0A1B0GUS4 154 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 SAP30O75446 220 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 IGLL1P15814 213 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 OR9G4Q8NGQ1 327 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 Q8WTZ3 238 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
NXF1-216ENST00000533499 TMEM147Q9BVK8 224 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 NPVFQ9HCQ7 196 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 UQCC1Q9NVA1 299 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 PEMTQ9UBM1 199 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 PUS1Q9Y606 427 aaKnown RBP eCLIP13.35□□□□□ -0.27
NXF1-216ENST00000533499 VWFP04275 2813 aa13.35□□□□□ -0.27
NXF1-216ENST00000533499 NOTCH3Q9UM47 2321 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 NDUFA4O00483 81 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 FABP1P07148 127 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 RD3LP0DJH9 198 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 LYL1P12980 280 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 AP2S1P53680 142 aaPredicted RBP13.34□□□□□ -0.27
NXF1-216ENST00000533499 ZNF90Q03938 601 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 BAXQ07812 192 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 TOMM20LQ6UXN7 152 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 ZNF546Q86UE3 836 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 AKAP14Q86UN6 197 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
NXF1-216ENST00000533499 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
NXF1-216ENST00000533499 DNHD1Q96M86 4753 aa13.33□□□□□ -0.27
NXF1-216ENST00000533499 ATP6V1FQ16864 119 aa13.33□□□□□ -0.28
NXF1-216ENST00000533499 TMEM144Q7Z5S9 345 aa13.33□□□□□ -0.28
NXF1-216ENST00000533499 THAP8Q8NA92 274 aa13.33□□□□□ -0.28
NXF1-216ENST00000533499 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
NXF1-216ENST00000533499 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
NXF1-216ENST00000533499 PBDC1Q9BVG4 233 aa13.33□□□□□ -0.28
NXF1-216ENST00000533499 UFC1Q9Y3C8 167 aa13.33□□□□□ -0.28
NXF1-216ENST00000533499 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 IGHV3-49A0A0A0MS15 119 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 ARPC5O15511 151 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 EDN2P20800 178 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
NXF1-216ENST00000533499 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 WFDC9Q8NEX5 89 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 DYNLRB2Q8TF09 96 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 TRGV9Q99603 122 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 GINS3Q9BRX5 216 aa13.32□□□□□ -0.28
NXF1-216ENST00000533499 IGKV1OR2-108A0A075B7D4 117 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 LGALS9O00182 355 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 TOMM40O96008 361 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 IL4P05112 153 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 PSG1P11464 419 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 FGF7P21781 194 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 GATA2P23769 480 aaPredicted RBP13.31□□□□□ -0.28
NXF1-216ENST00000533499 LYZP61626 148 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 RAB31Q13636 194 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 BTNL8Q6UX41 500 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 ST6GAL2Q96JF0 529 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
NXF1-216ENST00000533499 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
NXF1-216ENST00000533499 FNDC10F2Z333 226 aa13.3□□□□□ -0.28
NXF1-216ENST00000533499 G3V3Q6 166 aa13.3□□□□□ -0.28
NXF1-216ENST00000533499 FOLR2P14207 255 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms