RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 ATP5L2Q7Z4Y8 100 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 MESP1Q9BRJ9 268 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 CYTL1Q9NRR1 136 aa6.63□□□□□ -1.35
CSRP1-218ENST00000533402 LIPT2A6NK58 231 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 LILRA1O75019 489 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 PCSK4Q6UW60 755 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 AMELYQ99218 206 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
CSRP1-218ENST00000533402 LINC00305Q7Z4B0 112 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 COL6A6A6NMZ7 2263 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 TMEM14DPA8MWL7 114 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 IGLV3-19P01714 112 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 ECSCRQ19T08 205 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 WDR82Q6UXN9 313 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 FAM168AQ92567 244 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
CSRP1-218ENST00000533402 LSM4Q9Y4Z0 139 aaKnown RBP6.62□□□□□ -1.35
CSRP1-218ENST00000533402 A0A1W2PPM0 123 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 E9PQ18 207 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 BGLAPP02818 100 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 Q96M66 194 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 DYSFO75923 2080 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 TRAV24A0A0B4J272 114 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 NAPSAO96009 420 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 CHAC1Q9BUX1 264 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 WFDC1Q9HC57 220 aa6.62□□□□□ -1.35
CSRP1-218ENST00000533402 TNRC6AQ8NDV7 1962 aaKnown RBP6.62□□□□□ -1.35
CSRP1-218ENST00000533402 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 IGHV2-70DA0A0C4DH43 119 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 H3BMM0 161 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 J3KT08 172 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 PRSS41Q7RTY9 318 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 UBE2WQ96B02 151 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 CCL4L1Q8NHW4 92 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 TSKUQ8WUA8 353 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 C16orf92Q96LL3 132 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 ANXA2RQ3ZCQ2 193 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 LINC01555Q8NAE3 123 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 TMEM56-RWDD3S4R434 201 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 COL4A6Q14031 1691 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 SHANK1Q9Y566 2161 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 NPIPB4C9JG80 1138 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 NBEAP1P0C6P0 100 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 ZNF688P0C7X2 276 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 CNTFRP26992 372 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A2PQ658T7 463 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 LINC01551Q86U37 167 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 A0A1W2PQD3 144 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A10PA6NDY2 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A18PA6NE21 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A16PA6NEW6 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A20PA6NIJ5 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A8PA6NJQ4 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A7PA6NKC0 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A22PA8MWA6 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A12PA8MX19 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A5PA8MXJ8 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A23PA8MXZ1 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A15PP0C7V4 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A13PP0C7W8 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A14PP0C7W9 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 FAM90A24PP0C7X0 464 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 DRD3P35462 400 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 HERV-K104P63124 156 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 TCF19Q9Y242 345 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 SPTAN1Q13813 2472 aaKnown RBP6.61□□□□□ -1.35
CSRP1-218ENST00000533402 SRSF1Q07955 248 aaKnown RBP eCLIP6.61□□□□□ -1.35
CSRP1-218ENST00000533402 ZP4Q12836 540 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 HCP5Q6MZN7 132 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 CIARTQ8N365 385 aaPredicted RBP6.61□□□□□ -1.35
CSRP1-218ENST00000533402 AGMATQ9BSE5 352 aa6.61□□□□□ -1.35
CSRP1-218ENST00000533402 ZAR1Q86SH2 424 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 UTRNP46939 3433 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 NGFRP08138 427 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 WFDC6Q9BQY6 131 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 TMEM258P61165 79 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 C3orf56Q8N813 242 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 NPIPB3Q92617 1050 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 DUX5Q96PT3 197 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 CLEC7AQ9BXN2 247 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 VGLL1Q99990 258 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 IGKV3D-15A0A087WSY6 115 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 TRBV6-7A0A0A0MS04 114 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 IGHV2-26A0A0B4J1V2 119 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 IGKV3-15P01624 115 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
CSRP1-218ENST00000533402 FBXL7Q9UJT9 491 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 CENPVL1A0A0U1RR11 272 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 WISP3O95389 354 aaPredicted RBP6.6□□□□□ -1.35
CSRP1-218ENST00000533402 PCNX1Q96RV3 2341 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 C2orf16Q68DN1 1984 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
CSRP1-218ENST00000533402 PPBPP02775 128 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms