RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ATG101Q9BSB4 218 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 Q9H521 79 aa8.27□□□□□ -1.09
CMTM1-216ENST00000533078 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 H3BMM0 161 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 SLC25A4P12235 298 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 RCVRNP35243 200 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 ETV6P41212 452 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 HTR2BP41595 481 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-216ENST00000533078 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-216ENST00000533078 GLMPQ8WWB7 406 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 ZNF486Q96H40 463 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-216ENST00000533078 SCRT1Q9BWW7 348 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 GOLT1BQ9Y3E0 138 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
CMTM1-216ENST00000533078 A0A0B4J293 547 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 IGKV1-17P01599 117 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 IL4P05112 153 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 OR10J1P30954 320 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 ID1P41134 155 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 NKX2-1P43699 371 aaPredicted RBP8.25□□□□□ -1.09
CMTM1-216ENST00000533078 IZUMO4Q1ZYL8 232 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 ETFRF1Q6IPR1 90 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 LYSMD2Q8IV50 215 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 C15orf53Q8NAA6 179 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
CMTM1-216ENST00000533078 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
CMTM1-216ENST00000533078 FNDC4Q9H6D8 234 aaPredicted RBP8.25□□□□□ -1.09
CMTM1-216ENST00000533078 SCPEP1Q9HB40 452 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 COPZ2Q9P299 210 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CMTM1-216ENST00000533078 ZNF705FA8MVS1 300 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 HBE1P02100 147 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 ZNF705DP0CH99 300 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 ZNF705BP0CI00 300 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 RND2P52198 227 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 PIGPP57054 158 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 RND3P61587 244 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 DAD1P61803 113 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 DHODHQ02127 395 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 OXA1LQ15070 435 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 GSG1LQ6UXU4 331 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 NOXA1Q86UR1 476 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 CCDC71LQ8N9Z2 235 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 HEYLQ9NQ87 328 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 MRPL36Q9P0J6 103 aaKnown RBP8.24□□□□□ -1.09
CMTM1-216ENST00000533078 U3KQE9 123 aa8.24□□□□□ -1.09
CMTM1-216ENST00000533078 C3orf85A0A1B0GTC6 90 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 B3GALNT1O75752 331 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 IGKV1-5P01602 117 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 RD3LP0DJH9 198 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 SPCS3P61009 180 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 NEDD8Q15843 81 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 MLANAQ16655 118 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 SPATA31B1PQ5VZV4 182 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 FOXI2Q6ZQN5 318 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 SNX29P2Q8IUI4 249 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 GPX8Q8TED1 209 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 LINC00052Q96N35 136 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
CMTM1-216ENST00000533078 APOBP04114 4563 aaKnown RBP8.23□□□□□ -1.09
CMTM1-216ENST00000533078 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 BUB3O43684 328 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 FXYD7P58549 80 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 RRN3P1Q2M238 152 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 RNASE10Q5GAN6 216 aaKnown RBP8.22□□□□□ -1.09
CMTM1-216ENST00000533078 SAMD13Q5VXD3 122 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 EBLN2Q6P2I7 272 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 FAM219AQ8IW50 185 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 ZFAND1Q8TCF1 268 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 MAGT1Q9H0U3 335 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.22□□□□□ -1.09
CMTM1-216ENST00000533078 CACFD1Q9UGQ2 172 aa8.22□□□□□ -1.09
CMTM1-216ENST00000533078 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 TOMM40O96008 361 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 P0C879 139 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 PI3P19957 117 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 PSMB3P49720 205 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 USF2Q15853 346 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-216ENST00000533078 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 C6orf223Q8N319 242 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 OR52E5Q8NH55 327 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms