RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TGOLN2O43493 480 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR2C1O95371 312 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 LYL1P12980 280 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 TPT1P13693 172 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 SLURP1P55000 103 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 RAB32Q13637 225 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 SPSB3Q6PJ21 355 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 CACNG8Q8WXS5 425 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 BSCL2Q96G97 398 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 SLC25A32Q9H2D1 315 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 FNDC4Q9H6D8 234 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 MBD2Q9UBB5 411 aa8.64□□□□□ -1.03
TRAPPC4-211ENST00000533012 OVOL1O14753 267 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 GNG7O60262 68 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 SCGB2A1O75556 95 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 TMEM50AO95807 157 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 CD69Q07108 199 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 KLF5Q13887 457 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR4X1Q8NH49 305 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR4C12Q96R67 309 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 MCRIP2Q9BUT9 160 aaKnown RBP8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 MED9Q9NWA0 146 aa8.63□□□□□ -1.03
TRAPPC4-211ENST00000533012 TRAV30A0A087WSZ9 112 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 E5RGE8 158 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 F8W735 103 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 CLN5O75503 358 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 CTSGP08311 255 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 CAV2P51636 162 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 SYNJ2BPP57105 145 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 RELQ04864 619 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 TMEM14EPQ6UXP3 125 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 SLC16A13Q7RTY0 426 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 TMEM116Q8NCL8 245 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR10P1Q8NGE3 313 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 STOML3Q8TAV4 291 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 ACY3Q96HD9 319 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 RCC1LQ96I51 464 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 SLC35E1Q96K37 410 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 AQP10Q96PS8 301 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 ZNF471Q9BX82 626 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
TRAPPC4-211ENST00000533012 ZNF320A2RRD8 509 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 FAM24AA6NFZ4 105 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 DEDDO75618 318 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 SCAF4O95104 1147 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 RND2P52198 227 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 GAMTQ14353 236 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR8G2PQ6IF36 304 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 C1QL4Q86Z23 238 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 NPIPB3Q92617 1050 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 CHRDL1Q9BU40 450 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 ELOVL1Q9BW60 279 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 C11orf1Q9H5F2 150 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 MRPL36Q9P0J6 103 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 PEMTQ9UBM1 199 aa8.61□□□□□ -1.03
TRAPPC4-211ENST00000533012 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 PMS2P5A8MQ11 134 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 LGALS9O00182 355 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 IGLL1P15814 213 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 ADMP35318 185 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 TMEM252Q8N6L7 170 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR9G4Q8NGQ1 327 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 RNF126Q9BV68 326 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 GPR61Q9BZJ8 451 aa8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 LYRM2Q9NU23 88 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-211ENST00000533012 BORCS7-ASMTA0A0B4J1R7 106 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 RNF222A6NCQ9 220 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 SEC14L6B5MCN3 397 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 PRSS46E5RG02 174 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 H0YIZ8 118 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 NDUFA4O00483 81 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 JTBO76095 146 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 YIF1AO95070 293 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR10J1P30954 320 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 P2RY1P47900 373 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 INSL3P51460 131 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 C9orf66Q5T8R8 295 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 ZNF600Q6ZNG1 722 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 REC114Q7Z4M0 266 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 COMMD7Q86VX2 200 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 STX12Q86Y82 276 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR1S2Q8NGQ3 325 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 Q8WTZ3 238 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 CITED4Q96RK1 184 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 SLC25A31Q9H0C2 315 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 OR5AC2Q9NZP5 309 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 UFC1Q9Y3C8 167 aa8.59□□□□□ -1.03
TRAPPC4-211ENST00000533012 SMCO3A2RU48 225 aa8.58□□□□□ -1.04
TRAPPC4-211ENST00000533012 ZFP92A6NM28 416 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms