RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 CLN5O75503 358 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 NPY1RP25929 384 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 FCN2Q15485 313 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 TOMM20LQ6UXN7 152 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 ZNF600Q6ZNG1 722 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 TM2D3Q9BRN9 247 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 SMPXQ9UHP9 88 aa11.52□□□□□ -0.57
CPSF1-210ENST00000532935 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 TSPAN4O14817 238 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 PITX3O75364 302 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 SLC25A6P12236 298 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 HAGHQ16775 308 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 LAMTOR1Q6IAA8 161 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 LYG2Q86SG7 212 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 NOXA1Q86UR1 476 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 TMEM116Q8NCL8 245 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 RCHY1Q96PM5 261 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-210ENST00000532935 SEC22CQ9BRL7 303 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 GINS3Q9BRX5 216 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 TMED3Q9Y3Q3 217 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 PUS1Q9Y606 427 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPSF1-210ENST00000532935 U3KQ87 197 aa11.51□□□□□ -0.57
CPSF1-210ENST00000532935 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 TRAV14DV4A0A0A6YYC5 116 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 C9orf170A2RU37 121 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 CHEK1O14757 476 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 SCGB2A1O75556 95 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 IFNA10P01566 189 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 HOXB5P09067 269 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 SLC25A4P12235 298 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 DHRS2Q13268 280 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 PRSS54Q6PEW0 395 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-210ENST00000532935 C12orf45Q8N5I9 185 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-210ENST00000532935 OR11H7Q8NGC8 314 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 MITD1Q8WV92 249 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 RHPN1-AS1Q9BWJ2 59 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 SRD5A3Q9H8P0 318 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
CPSF1-210ENST00000532935 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 C1QBP02746 253 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 GIPP09681 153 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-210ENST00000532935 EIF2B2P49770 351 aaKnown RBP11.49□□□□□ -0.57
CPSF1-210ENST00000532935 RND2P52198 227 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 TIGITQ495A1 244 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 RNF2Q99496 336 aa11.49□□□□□ -0.57
CPSF1-210ENST00000532935 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
CPSF1-210ENST00000532935 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
CPSF1-210ENST00000532935 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
CPSF1-210ENST00000532935 RAP2BP61225 183 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 CD300CQ08708 224 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 OR1S2Q8NGQ3 325 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
CPSF1-210ENST00000532935 MED6O75586 246 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 IGLC1P0CG04 106 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 OR10J1P30954 320 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 BMI1P35226 326 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 ATP5IP56385 69 aaPredicted RBP11.47□□□□□ -0.57
CPSF1-210ENST00000532935 COQ8AQ8NI60 647 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 ST8SIA2Q92186 375 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 HYLS1Q96M11 299 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 MGAT4CQ9UBM8 478 aa11.47□□□□□ -0.57
CPSF1-210ENST00000532935 OR4C46A6NHA9 309 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 ADAP1O75689 374 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
CPSF1-210ENST00000532935 IFNA4P05014 189 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 IAPPP10997 89 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 CXCL3P19876 107 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 NPIPB3Q92617 1050 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 ACY3Q96HD9 319 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 UBQLN2Q9UHD9 624 aa11.46□□□□□ -0.57
CPSF1-210ENST00000532935 SYNGR2O43760 224 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 NPPCP23582 126 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 YPEL3P61236 119 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-210ENST00000532935 ODF3L2Q3SX64 289 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 LILRB2Q8N423 598 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 CIB3Q96Q77 187 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-210ENST00000532935 CITED4Q96RK1 184 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 METTL26Q96S19 204 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 MAGT1Q9H0U3 335 aa11.45□□□□□ -0.58
CPSF1-210ENST00000532935 KMT2CQ8NEZ4 4911 aaKnown RBP11.44□□□□□ -0.58
CPSF1-210ENST00000532935 IGKV3-7A0A075B6H7 116 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 IFNA21P01568 189 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms