RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 RAB32Q13637 225 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 GAMTQ14353 236 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 OXA1LQ15070 435 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 TMEM14EPQ6UXP3 125 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 ZNF600Q6ZNG1 722 aa18.81■□□□□ 0.6
USP48-214ENST00000532737 WDR89Q96FK6 387 aaPredicted RBP18.81■□□□□ 0.6
USP48-214ENST00000532737 AURKAIP1Q9NWT8 199 aaPredicted RBP18.81■□□□□ 0.6
USP48-214ENST00000532737 TRAV30A0A087WSZ9 112 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 PMS2P5A8MQ11 134 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 CCNKO75909 580 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 OR10J1P30954 320 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 H2BFSP57053 126 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 S100A10P60903 97 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 TOMM20LQ6UXN7 152 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 OR1S2Q8NGQ3 325 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 SLC35E1Q96K37 410 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 MGAT4CQ9UBM8 478 aa18.8■□□□□ 0.6
USP48-214ENST00000532737 ZMAT5Q9UDW3 170 aaKnown RBP18.8■□□□□ 0.6
USP48-214ENST00000532737 L7N2F9 121 aa18.79■□□□□ 0.6
USP48-214ENST00000532737 ZNF207O43670 478 aaKnown RBP18.79■□□□□ 0.6
USP48-214ENST00000532737 METTL15P1P0C7V9 234 aa18.79■□□□□ 0.6
USP48-214ENST00000532737 C8orf88P0DMB2 117 aa18.79■□□□□ 0.6
USP48-214ENST00000532737 VAMP2P63027 116 aa18.79■□□□□ 0.6
USP48-214ENST00000532737 DAZ1Q9NQZ3 744 aaKnown RBP18.79■□□□□ 0.6
USP48-214ENST00000532737 PUS1Q9Y606 427 aaKnown RBP eCLIP18.79■□□□□ 0.6
USP48-214ENST00000532737 DNAH3Q8TD57 4116 aa18.79■□□□□ 0.6
USP48-214ENST00000532737 WI2-2373I1.2A0A1W2PRP0 233 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 K7EMT4 169 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 DEFB114Q30KQ6 69 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 OR8G2PQ6IF36 304 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 DYNLRB2Q8TF09 96 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 MARC2Q969Z3 335 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 NMES1Q9C002 83 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 SELENOKQ9Y6D0 94 aa18.78■□□□□ 0.6
USP48-214ENST00000532737 SCGB2A1O75556 95 aa18.77■□□□□ 0.6
USP48-214ENST00000532737 PRR25Q96S07 402 aa18.77■□□□□ 0.6
USP48-214ENST00000532737 ZFAND3Q9H8U3 227 aa18.77■□□□□ 0.6
USP48-214ENST00000532737 MRPL27Q9P0M9 148 aaKnown RBP18.77■□□□□ 0.6
USP48-214ENST00000532737 MLXQ9UH92 298 aa18.77■□□□□ 0.6
USP48-214ENST00000532737 ZNF256Q9Y2P7 627 aaPredicted RBP18.77■□□□□ 0.6
USP48-214ENST00000532737 IZUMO1RA6ND01 250 aa18.76■□□□□ 0.59
USP48-214ENST00000532737 YPEL3P61236 119 aaPredicted RBP18.76■□□□□ 0.59
USP48-214ENST00000532737 CYCSP99999 105 aaKnown RBP18.76■□□□□ 0.59
USP48-214ENST00000532737 CD300EQ496F6 205 aaPredicted RBP18.76■□□□□ 0.59
USP48-214ENST00000532737 ACOT7LQ6ZUV0 252 aa18.76■□□□□ 0.59
USP48-214ENST00000532737 IGKV1D-37A0A075B6S9 117 aa18.75■□□□□ 0.59
USP48-214ENST00000532737 FAM24AA6NFZ4 105 aa18.75■□□□□ 0.59
USP48-214ENST00000532737 PVALBP20472 110 aaPredicted RBP18.75■□□□□ 0.59
USP48-214ENST00000532737 BCAP31P51572 246 aa18.75■□□□□ 0.59
USP48-214ENST00000532737 ARL16Q0P5N6 197 aa18.75■□□□□ 0.59
USP48-214ENST00000532737 TECRQ9NZ01 308 aaKnown RBP18.75■□□□□ 0.59
USP48-214ENST00000532737 ZFP92A6NM28 416 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 K7EIL1 84 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 CXCL3P19876 107 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 CAV2P51636 162 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 BTNL8Q6UX41 500 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 Q8WTZ3 238 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 SORL1Q92673 2214 aa18.74■□□□□ 0.59
USP48-214ENST00000532737 IGKV1OR2-108A0A075B7D4 117 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 DEDDO75618 318 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 FCN2Q15485 313 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 LRRC37A5PQ49AS3 106 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 THAP8Q8NA92 274 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 OR10P1Q8NGE3 313 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 OR2K2Q8NGT1 345 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 GINS3Q9BRX5 216 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 MED28Q9H204 178 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 SMPXQ9UHP9 88 aa18.73■□□□□ 0.59
USP48-214ENST00000532737 IGHV3-49A0A0A0MS15 119 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 TRAV14DV4A0A0A6YYC5 116 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 IGHV7-4-1A0A0J9YVY3 117 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 H0YIZ8 118 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 TOMM40O96008 361 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 RD3LP0DJH9 198 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 GP9P14770 177 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 RRAS2P62070 204 aaPredicted RBP18.72■□□□□ 0.59
USP48-214ENST00000532737 ZNF90Q03938 601 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 LCN12Q6JVE5 192 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 PPP1R1CQ8WVI7 109 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 LYRM2Q9NU23 88 aaPredicted RBP18.72■□□□□ 0.59
USP48-214ENST00000532737 OR5AC2Q9NZP5 309 aa18.72■□□□□ 0.59
USP48-214ENST00000532737 SCAF4O95104 1147 aaKnown RBP18.71■□□□□ 0.59
USP48-214ENST00000532737 PSG1P11464 419 aa18.71■□□□□ 0.59
USP48-214ENST00000532737 DLK1P80370 383 aa18.71■□□□□ 0.59
USP48-214ENST00000532737 OR11H7Q8NGC8 314 aa18.71■□□□□ 0.59
USP48-214ENST00000532737 TRGV9Q99603 122 aa18.71■□□□□ 0.59
USP48-214ENST00000532737 RHPN1-AS1Q9BWJ2 59 aa18.71■□□□□ 0.59
USP48-214ENST00000532737 IGHV3OR16-13A0A075B7E8 117 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 IGHV3-74A0A0B4J1X5 117 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 IGSF23A1L1A6 192 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 SMCO3A2RU48 225 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 ZNF785A8K8V0 405 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 CST7O76096 145 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 APOHP02749 345 aaPredicted RBP18.7■□□□□ 0.58
USP48-214ENST00000532737 RLN2P04090 185 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 AKR1C1Q04828 323 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 TMEM61Q8N0U2 210 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 TMEM252Q8N6L7 170 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 RNF126Q9BV68 326 aa18.7■□□□□ 0.58
USP48-214ENST00000532737 CHEK1O14757 476 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms