RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 GNG7O60262 68 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 YIF1AO95070 293 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 NXPH3O95157 252 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 SLC25A6P12236 298 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 BSXQ3C1V8 233 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 FAM90A2PQ658T7 463 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 APRG1Q8IVJ8 170 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 TXN2Q99757 166 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
SMG1-203ENST00000532700 NUDT15Q9NV35 164 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 TRAV6A0A075B6T7 132 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 HOXB5P09067 269 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 HTR2BP41595 481 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 TFPI2P48307 235 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 DEFA1P59665 94 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 DEFA3P59666 94 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 TNFRSF9Q07011 255 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 ENKURQ8TC29 256 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 ST8SIA2Q92186 375 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 HYDINQ4G0P3 5121 aa13.17□□□□□ -0.3
SMG1-203ENST00000532700 DNAH1Q9P2D7 4330 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 CORTO00230 105 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 TMEM50AO95807 157 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 IFNA21P01568 189 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 RPL35AP18077 110 aaKnown RBP13.16□□□□□ -0.3
SMG1-203ENST00000532700 RELQ04864 619 aaPredicted RBP13.16□□□□□ -0.3
SMG1-203ENST00000532700 DEFB135Q30KP9 77 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 HSPB7Q9UBY9 170 aa13.16□□□□□ -0.3
SMG1-203ENST00000532700 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMG1-203ENST00000532700 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
SMG1-203ENST00000532700 IFITM3Q01628 133 aa13.15□□□□□ -0.3
SMG1-203ENST00000532700 GGNBP1Q5YKI7 109 aa13.15□□□□□ -0.3
SMG1-203ENST00000532700 NOXA1Q86UR1 476 aa13.15□□□□□ -0.3
SMG1-203ENST00000532700 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
SMG1-203ENST00000532700 PITX3O75364 302 aa13.14□□□□□ -0.31
SMG1-203ENST00000532700 MED6O75586 246 aa13.14□□□□□ -0.31
SMG1-203ENST00000532700 LAMTOR1Q6IAA8 161 aa13.14□□□□□ -0.31
SMG1-203ENST00000532700 DTD1Q8TEA8 209 aa13.14□□□□□ -0.31
SMG1-203ENST00000532700 VSIRQ9H7M9 311 aa13.14□□□□□ -0.31
SMG1-203ENST00000532700 U3KQ87 197 aa13.14□□□□□ -0.31
SMG1-203ENST00000532700 TRAV14DV4A0A0A6YYC5 116 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 OR4C46A6NHA9 309 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
SMG1-203ENST00000532700 TIGITQ495A1 244 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 SLC24A4Q8NFF2 622 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 RBKSQ9H477 322 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
SMG1-203ENST00000532700 A0A0J9YWU9 116 aa13.12□□□□□ -0.31
SMG1-203ENST00000532700 ADAP1O75689 374 aa13.12□□□□□ -0.31
SMG1-203ENST00000532700 DFFBO76075 338 aa13.12□□□□□ -0.31
SMG1-203ENST00000532700 OPRK1P41145 380 aa13.12□□□□□ -0.31
SMG1-203ENST00000532700 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
SMG1-203ENST00000532700 ZNF431Q8TF32 576 aaPredicted RBP13.12□□□□□ -0.31
SMG1-203ENST00000532700 RPS10-NUDT3A0A1W2PQS6 291 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 CLN5O75503 358 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 IFNA10P01566 189 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 NPY1RP25929 384 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 NPBWR1P48145 328 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 WFDC3Q8IUB2 231 aa13.11□□□□□ -0.31
SMG1-203ENST00000532700 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
SMG1-203ENST00000532700 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
SMG1-203ENST00000532700 ALMS1Q8TCU4 4167 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 IL5P05113 134 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
SMG1-203ENST00000532700 ETFRF1Q6IPR1 90 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 PRSS54Q6PEW0 395 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 IL17DQ8TAD2 202 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
SMG1-203ENST00000532700 GPN1Q9HCN4 374 aaPredicted RBP13.1□□□□□ -0.31
SMG1-203ENST00000532700 PLECQ15149 4684 aaKnown RBP13.1□□□□□ -0.31
SMG1-203ENST00000532700 SPRY2O43597 315 aa13.09□□□□□ -0.31
SMG1-203ENST00000532700 SYNGR2O43760 224 aa13.09□□□□□ -0.31
SMG1-203ENST00000532700 SCGB2A1O75556 95 aa13.09□□□□□ -0.31
SMG1-203ENST00000532700 IGLC1P0CG04 106 aa13.09□□□□□ -0.31
SMG1-203ENST00000532700 RND2P52198 227 aa13.09□□□□□ -0.31
SMG1-203ENST00000532700 C12orf45Q8N5I9 185 aaPredicted RBP13.09□□□□□ -0.31
SMG1-203ENST00000532700 RNF183Q96D59 192 aa13.09□□□□□ -0.31
SMG1-203ENST00000532700 SLC25A4P12235 298 aa13.08□□□□□ -0.32
SMG1-203ENST00000532700 NKX2-1P43699 371 aaPredicted RBP13.08□□□□□ -0.32
SMG1-203ENST00000532700 APOC4P55056 127 aa13.08□□□□□ -0.32
SMG1-203ENST00000532700 ID3Q02535 119 aa13.08□□□□□ -0.32
SMG1-203ENST00000532700 IAH1Q2TAA2 248 aaPredicted RBP13.08□□□□□ -0.32
SMG1-203ENST00000532700 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
SMG1-203ENST00000532700 Q6ZWC4 215 aa13.08□□□□□ -0.32
SMG1-203ENST00000532700 GINS3Q9BRX5 216 aa13.08□□□□□ -0.32
SMG1-203ENST00000532700 EPPK1P58107 5090 aaKnown RBP13.08□□□□□ -0.32
SMG1-203ENST00000532700 AGRNO00468 2067 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1230.6 ms