RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 J3QRE1 110 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 BRD3OSQ6XYD6 125 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 IGKV1-12A0A0C4DH73 117 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 MLNRO43193 412 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 IGKV1D-12P01611 117 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 RPRMLQ8N4K4 120 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 KIR3DL3Q8N743 410 aa12.23□□□□□ -0.45
PCDHA9-202ENST00000532602 IGKV1-27A0A075B6S5 117 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 CBLN1P23435 193 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 CNTFRP26992 372 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 OTX1P32242 354 aaPredicted RBP12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 B3GALT5-AS1P59052 145 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 GFI1Q99684 422 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 ABCA4P78363 2273 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 SCO2A0A1W2PP80 73 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 M0R1W7 72 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 IGHV1-8P0DP01 117 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 IGKV1D-8A0A087WSZ0 117 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM200BQ69YZ2 307 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 CD55P08174 381 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 MALP21145 153 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 SRSF7Q16629 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 TMEM42Q69YG0 159 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 MAPK1IP1LQ8NDC0 245 aa12.22□□□□□ -0.45
PCDHA9-202ENST00000532602 SAP30O75446 220 aa12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 IGHG3P01860 377 aa12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 APOHP02749 345 aaPredicted RBP12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 SSC4DQ8WTU2 575 aa12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 ZNF585BQ52M93 769 aa12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 CRPP02741 224 aa12.21□□□□□ -0.45
PCDHA9-202ENST00000532602 A0A1W2PRE2 83 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 COTL1Q14019 142 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 SPSB3Q6PJ21 355 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 RNF144BQ7Z419 303 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 TTC9CQ8N5M4 171 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 C18orf12Q96KH6 178 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 C18orf15Q96N68 181 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 ST20Q9HBF5 79 aa12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.46
PCDHA9-202ENST00000532602 KIAA1671Q9BY89 1806 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 NAT1P18440 290 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 CACNG7P62955 275 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 TPTE2P1Q5T6R2 138 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 CD177Q8N6Q3 437 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 PRSS33Q8NF86 280 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 F8VVB4 439 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 F8VWA3 439 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 TMEM50AO95807 157 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 COL8A2P25067 703 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 ATP5G3P48201 142 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 NUDT10Q8NFP7 164 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 HELZP42694 1942 aaKnown RBP12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 K7ENP7 123 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 ZNF324BQ6AW86 544 aaPredicted RBP12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 ZNF474Q6S9Z5 364 aaPredicted RBP12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 CACNA1DQ01668 2161 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 CCL20P78556 96 aa12.2□□□□□ -0.46
PCDHA9-202ENST00000532602 NDUFS8O00217 210 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 H3BUX3 64 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 VGLL1Q99990 258 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 EPDR1Q9UM22 224 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 RNF114Q9Y508 228 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 ARTNQ5T4W7 220 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 SIGLEC15Q6ZMC9 328 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 SLC17A3O00476 420 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 VCX2Q9H322 139 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 PNRC2Q9NPJ4 139 aaKnown RBP12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 JKAMPQ9P055 326 aa12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 TBL2Q9Y4P3 447 aaKnown RBP12.19□□□□□ -0.46
PCDHA9-202ENST00000532602 ANAPC1Q9H1A4 1944 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 ZNF98A6NK75 572 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 TP53BP1Q12888 1972 aaPredicted RBP12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 PSG8Q9UQ74 426 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 PPBPP02775 128 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 PLP1P60201 277 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 IGHV1-3A0A0C4DH29 117 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 C15orf32Q32M92 178 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 SP5Q6BEB4 398 aaPredicted RBP12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 FOXC2Q99958 501 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 BEX4Q9NWD9 120 aaPredicted RBP12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 GNG5P63218 68 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 ID3Q02535 119 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 C3orf36Q3SXR2 165 aa12.18□□□□□ -0.46
PCDHA9-202ENST00000532602 LYPD2Q6UXB3 125 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 330.7 ms