RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 CCSO14618 274 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 CHEK1O14757 476 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 SCAF4O95104 1147 aaKnown RBP10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 APOHP02749 345 aaPredicted RBP10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 CD7P09564 240 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 NKX2-1P43699 371 aaPredicted RBP10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 DCTN2Q13561 401 aaKnown RBP10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 GAMTQ14353 236 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 IAH1Q2TAA2 248 aaPredicted RBP10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 SLC16A13Q7RTY0 426 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 LILRB2Q8N423 598 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 CIB3Q96Q77 187 aaPredicted RBP10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 MARVELD1Q9BSK0 173 aa10.45□□□□□ -0.74
TSPAN4-220ENST00000532375 TRAV14DV4A0A0A6YYC5 116 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 YIF1AO95070 293 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 MBPP02686 304 aaPredicted RBP10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 IFNA4P05014 189 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 YPEL3P61236 119 aaPredicted RBP10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 OR1S2Q8NGQ3 325 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 ENKURQ8TC29 256 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 SMIM8Q96KF7 97 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 RNF2Q99496 336 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 C11orf1Q9H5F2 150 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 VSIRQ9H7M9 311 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 RCL1Q9Y2P8 373 aaKnown RBP10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 U3KQE9 123 aa10.44□□□□□ -0.74
TSPAN4-220ENST00000532375 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 TSPAN4O14817 238 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 FRMD6-AS1P0C7T7 363 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 OR10J1P30954 320 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 LINC00322Q6ZN03 302 aaPredicted RBP10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 ACY3Q96HD9 319 aa10.43□□□□□ -0.74
TSPAN4-220ENST00000532375 IGHV3OR16-13A0A075B7E8 117 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 IGHV3-74A0A0B4J1X5 117 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 INMT-MINDY4F8WBC2 141 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 H3BP45 60 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 CRYBB3P26998 211 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 RAB11AP62491 216 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 GUCA2BQ16661 112 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 SPANXN5Q5MJ07 72 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 TMEM14EPQ6UXP3 125 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 SBSPONQ8IVN8 264 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 ST8SIA2Q92186 375 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 NEURL2Q9BR09 285 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 GSKIPQ9P0R6 139 aa10.42□□□□□ -0.74
TSPAN4-220ENST00000532375 C7orf66A4D0T2 115 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 SNRPGP15A8MWD9 76 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 SSSCA1O60232 199 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 CCNKO75909 580 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 PSG1P11464 419 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 CD81P60033 236 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 THAP8Q8NA92 274 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 C2orf50Q96LR7 162 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 RAB40CQ96S21 281 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 ASCL2Q99929 193 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 SPAG8Q99932 426 aaPredicted RBP10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 PSENENQ9NZ42 101 aa10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 STRAPQ9Y3F4 350 aaKnown RBP10.41□□□□□ -0.74
TSPAN4-220ENST00000532375 TOMM40O96008 361 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 TAS2R30P59541 319 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 DEFA1P59665 94 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 DEFA3P59666 94 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 RPP30P78346 268 aaKnown RBP10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 ZNF90Q03938 601 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 ARL16Q0P5N6 197 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 USF2Q15853 346 aaPredicted RBP10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 RBPMS2Q6ZRY4 209 aaKnown RBP10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 GTSCR1Q86UQ5 136 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 DEFB125Q8N687 156 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 Q8WTZ3 238 aa10.4□□□□□ -0.74
TSPAN4-220ENST00000532375 IGHV3-66A0A0C4DH42 116 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 K7EPK0 472 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 PRAF2O60831 178 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 TSC22D2O75157 780 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 RD3LP0DJH9 198 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 NPPCP23582 126 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 LAMTOR1Q6IAA8 161 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 TMEM182Q6ZP80 229 aaPredicted RBP10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 STPG3Q8N7X2 389 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 SLC35E1Q96K37 410 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 TRGV9Q99603 122 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 TENM3Q9P273 2699 aa10.39□□□□□ -0.75
TSPAN4-220ENST00000532375 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 C5orf51A6NDU8 294 aa10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 FAM25EA8MYX2 175 aa10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 DFFBO76075 338 aa10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 SCGB1D2O95969 90 aa10.38□□□□□ -0.75
TSPAN4-220ENST00000532375 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms