RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 IGLC1P0CG04 106 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 SLC16A13Q7RTY0 426 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 NOXA1Q86UR1 476 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 LILRB2Q8N423 598 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
CTSB-223ENST00000532370 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.33
CTSB-223ENST00000532370 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.33
CTSB-223ENST00000532370 FAM90A26D6RGX4 464 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 TSPAN4O14817 238 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.33
CTSB-223ENST00000532370 SLC25A4P12235 298 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 OR10J1P30954 320 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 HAGHQ16775 308 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 MZT2BQ6NZ67 158 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 SRD5A3Q9H8P0 318 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 NUDT15Q9NV35 164 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 STAB2Q8WWQ8 2551 aa13.02□□□□□ -0.33
CTSB-223ENST00000532370 WRBO00258 174 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 SYNGR2O43760 224 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 LAMTOR1Q6IAA8 161 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 SPAG8Q99932 426 aaPredicted RBP13.01□□□□□ -0.33
CTSB-223ENST00000532370 GINS3Q9BRX5 216 aa13.01□□□□□ -0.33
CTSB-223ENST00000532370 PAIP2BQ9ULR5 123 aaKnown RBP13.01□□□□□ -0.33
CTSB-223ENST00000532370 NBEAL2Q6ZNJ1 2754 aa13□□□□□ -0.33
CTSB-223ENST00000532370 IGKV3-7A0A075B6H7 116 aa13□□□□□ -0.33
CTSB-223ENST00000532370 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
CTSB-223ENST00000532370 MED6O75586 246 aa13□□□□□ -0.33
CTSB-223ENST00000532370 LINC00322Q6ZN03 302 aaPredicted RBP13□□□□□ -0.33
CTSB-223ENST00000532370 OR1S2Q8NGQ3 325 aa13□□□□□ -0.33
CTSB-223ENST00000532370 RCHY1Q96PM5 261 aa13□□□□□ -0.33
CTSB-223ENST00000532370 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
CTSB-223ENST00000532370 UBQLN2Q9UHD9 624 aa13□□□□□ -0.33
CTSB-223ENST00000532370 IFNA21P01568 189 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 TFPI2P48307 235 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 ATP5IP56385 69 aaPredicted RBP12.99□□□□□ -0.33
CTSB-223ENST00000532370 DEFA1P59665 94 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 DEFA3P59666 94 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 POLR2GP62487 172 aaKnown RBP eCLIP12.99□□□□□ -0.33
CTSB-223ENST00000532370 ID3Q02535 119 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 GAMTQ14353 236 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 FAM90A2PQ658T7 463 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 OR4D5Q8NGN0 318 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 SEC22CQ9BRL7 303 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 VSIRQ9H7M9 311 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 TENM3Q9P273 2699 aa12.99□□□□□ -0.33
CTSB-223ENST00000532370 FAM240BA0A1B0GVZ2 78 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 H3BP45 60 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 SCGB2A1O75556 95 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 DFFBO76075 338 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 H2AFB2P0C5Z0 115 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 NPPCP23582 126 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 GPX4P36969 197 aaPredicted RBP12.98□□□□□ -0.33
CTSB-223ENST00000532370 YPEL3P61236 119 aaPredicted RBP12.98□□□□□ -0.33
CTSB-223ENST00000532370 SPANXN5Q5MJ07 72 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 CIB3Q96Q77 187 aaPredicted RBP12.98□□□□□ -0.33
CTSB-223ENST00000532370 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
CTSB-223ENST00000532370 CCSO14618 274 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 CRYBB3P26998 211 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
CTSB-223ENST00000532370 RAB11AP62491 216 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 IAH1Q2TAA2 248 aaPredicted RBP12.97□□□□□ -0.33
CTSB-223ENST00000532370 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 Q8WTZ3 238 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 METTL26Q96S19 204 aa12.97□□□□□ -0.33
CTSB-223ENST00000532370 IGKV1D-37A0A075B6S9 117 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 OR4C46A6NHA9 309 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 SSSCA1O60232 199 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 RD3LP0DJH9 198 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 ZNF90Q03938 601 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 NRARPQ7Z6K4 114 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 ZNF431Q8TF32 576 aaPredicted RBP12.96□□□□□ -0.33
CTSB-223ENST00000532370 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 RETNQ9HD89 108 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 GSKIPQ9P0R6 139 aa12.96□□□□□ -0.33
CTSB-223ENST00000532370 PRSS46E5RG02 174 aa12.95□□□□□ -0.34
CTSB-223ENST00000532370 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
CTSB-223ENST00000532370 TOMM40O96008 361 aa12.95□□□□□ -0.34
CTSB-223ENST00000532370 IL4P05112 153 aa12.95□□□□□ -0.34
CTSB-223ENST00000532370 PSG1P11464 419 aa12.95□□□□□ -0.34
CTSB-223ENST00000532370 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
CTSB-223ENST00000532370 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
CTSB-223ENST00000532370 WFDC3Q8IUB2 231 aa12.95□□□□□ -0.34
CTSB-223ENST00000532370 ZBTB8BQ8NAP8 495 aaPredicted RBP12.95□□□□□ -0.34
CTSB-223ENST00000532370 KMT2CQ8NEZ4 4911 aaKnown RBP12.95□□□□□ -0.34
CTSB-223ENST00000532370 IGKV1OR2-108A0A075B7D4 117 aa12.94□□□□□ -0.34
CTSB-223ENST00000532370 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
CTSB-223ENST00000532370 BMI1P35226 326 aa12.94□□□□□ -0.34
CTSB-223ENST00000532370 PAX9P55771 341 aa12.94□□□□□ -0.34
CTSB-223ENST00000532370 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
CTSB-223ENST00000532370 ZNF124Q15973 351 aa12.94□□□□□ -0.34
CTSB-223ENST00000532370 MS4A6AQ9H2W1 248 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms