RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 HBG1P69891 147 aa12.97□□□□□ -0.33
SF3B2-211ENST00000531041 HBG2P69892 147 aa12.97□□□□□ -0.33
SF3B2-211ENST00000531041 EWSR1Q01844 656 aaKnown RBP eCLIP12.97□□□□□ -0.33
SF3B2-211ENST00000531041 BAXQ07812 192 aa12.97□□□□□ -0.33
SF3B2-211ENST00000531041 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
SF3B2-211ENST00000531041 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
SF3B2-211ENST00000531041 TRRAPQ9Y4A5 3859 aa12.97□□□□□ -0.33
SF3B2-211ENST00000531041 IGKV1-17P01599 117 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 RPL12P30050 165 aaKnown RBP12.96□□□□□ -0.33
SF3B2-211ENST00000531041 OR10J1P30954 320 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 NHLH2Q02577 135 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 RELQ04864 619 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-211ENST00000531041 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 TMEM144Q7Z5S9 345 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 TMEM217Q8N7C4 229 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 THAP8Q8NA92 274 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 OR1S2Q8NGQ3 325 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 ST6GAL2Q96JF0 529 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 NPVFQ9HCQ7 196 aa12.96□□□□□ -0.33
SF3B2-211ENST00000531041 LGALS9O00182 355 aa12.96□□□□□ -0.34
SF3B2-211ENST00000531041 ATP6V1FQ16864 119 aa12.96□□□□□ -0.34
SF3B2-211ENST00000531041 FAM106AQ4KMX7 169 aa12.96□□□□□ -0.34
SF3B2-211ENST00000531041 C1QL4Q86Z23 238 aa12.96□□□□□ -0.34
SF3B2-211ENST00000531041 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.34
SF3B2-211ENST00000531041 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.34
SF3B2-211ENST00000531041 IGKV1OR2-108A0A075B7D4 117 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 IGHV3-35A0A0C4DH35 117 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 NDUFA4O00483 81 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 OVOL1O14753 267 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 SYNJ2BPP57105 145 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 YPEL3P61236 119 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-211ENST00000531041 AKR1C1Q04828 323 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 VWC2Q2TAL6 325 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 TIGITQ495A1 244 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 ZNF600Q6ZNG1 722 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 ZNF546Q86UE3 836 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 LILRB2Q8N423 598 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 AQP10Q96PS8 301 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 HSPB11Q9Y547 144 aa12.95□□□□□ -0.34
SF3B2-211ENST00000531041 IGKV1D-37A0A075B6S9 117 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 SMCO3A2RU48 225 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 CD33P20138 364 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 REC114Q7Z4M0 266 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 OR5C1Q8NGR4 320 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 TRGV9Q99603 122 aa12.94□□□□□ -0.34
SF3B2-211ENST00000531041 FXYD6-FXYD2A0A087WZ82 144 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 SMLR1H3BR10 107 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 NUP62P37198 522 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-211ENST00000531041 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 UNQ9165/PRO28630Q6UXU0 137 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 TCTE3Q8IZS6 198 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 OR9G4Q8NGQ1 327 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 TMEM147Q9BVK8 224 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 UQCC1Q9NVA1 299 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 TNFSF18Q9UNG2 199 aa12.93□□□□□ -0.34
SF3B2-211ENST00000531041 A8MWP6 167 aa12.92□□□□□ -0.34
SF3B2-211ENST00000531041 TOMM40O96008 361 aa12.92□□□□□ -0.34
SF3B2-211ENST00000531041 TEPPQ6URK8 271 aa12.92□□□□□ -0.34
SF3B2-211ENST00000531041 AKAP14Q86UN6 197 aa12.92□□□□□ -0.34
SF3B2-211ENST00000531041 INO80EQ8NBZ0 244 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-211ENST00000531041 TMEM190Q8WZ59 177 aa12.92□□□□□ -0.34
SF3B2-211ENST00000531041 PEMTQ9UBM1 199 aa12.92□□□□□ -0.34
SF3B2-211ENST00000531041 LSM4Q9Y4Z0 139 aaKnown RBP12.92□□□□□ -0.34
SF3B2-211ENST00000531041 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
SF3B2-211ENST00000531041 ZNF320A2RRD8 509 aa12.91□□□□□ -0.34
SF3B2-211ENST00000531041 FABP1P07148 127 aa12.91□□□□□ -0.34
SF3B2-211ENST00000531041 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-211ENST00000531041 ZNF90Q03938 601 aa12.91□□□□□ -0.34
SF3B2-211ENST00000531041 TOMM20LQ6UXN7 152 aa12.91□□□□□ -0.34
SF3B2-211ENST00000531041 Q8WTZ3 238 aa12.91□□□□□ -0.34
SF3B2-211ENST00000531041 RCC1LQ96I51 464 aaKnown RBP12.91□□□□□ -0.34
SF3B2-211ENST00000531041 ZFAND3Q9H8U3 227 aa12.91□□□□□ -0.34
SF3B2-211ENST00000531041 RNF222A6NCQ9 220 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 HMSDA8MTL9 139 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 K7EMT4 169 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 YIF1AO95070 293 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 RD3LP0DJH9 198 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 PSG1P11464 419 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 CLINT1Q14677 625 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 OR11H4Q8NGC9 324 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
SF3B2-211ENST00000531041 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.34
SF3B2-211ENST00000531041 UBE2L5PA0A1B0GUS4 154 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 DFFBO76075 338 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 IL34Q6ZMJ4 242 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 ATP5SQ99766 215 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 C20orf24Q9BUV8 137 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 ELOVL1Q9BW60 279 aa12.89□□□□□ -0.35
SF3B2-211ENST00000531041 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
SF3B2-211ENST00000531041 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 ARPC5O15511 151 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 MPDU1O75352 247 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 CFDP00746 253 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-211ENST00000531041 CSN3P07498 182 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 SELENOTP62341 195 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 RAB31Q13636 194 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 TM4SF20Q53R12 229 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms