RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ST6GALNAC3Q8NDV1 305 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
CTNND1-227ENST00000530748 Q9UFV3 132 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 SERF1AO75920 110 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 DPM2O94777 84 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 FBLN7Q53RD9 439 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 OR10W1Q8NGF6 305 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 TSKUQ8WUA8 353 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 MBD3L1Q8WWY6 194 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 VSIRQ9H7M9 311 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 SDK1Q7Z5N4 2213 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 DOCK4Q8N1I0 1966 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 SNAI2O43623 268 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 MST1P26927 711 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 LINC00469Q8N7U9 141 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 SLX1AQ9BQ83 275 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 SLC25A2Q9BXI2 301 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 PPBPP02775 128 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 CD28P10747 220 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 KLRD1Q13241 179 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 FAM223BA6NKX1 122 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 IGKCP01834 107 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 CD5P06127 495 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 TREML4Q6UXN2 200 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 FAM223AQ8IWN6 122 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 NRN1Q9NPD7 142 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 RPUSD1Q9UJJ7 312 aaKnown RBP6.99□□□□□ -1.29
CTNND1-227ENST00000530748 CYSLTR1Q9Y271 337 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 TRAV5A0A0B4J249 113 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 A0A1B0GW64 132 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 STAG3L3P0CL85 134 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 GNLYP22749 145 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 TRGV9Q99603 122 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 GHRHP01286 108 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 LINC00614P0C842 121 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 COQ2Q96H96 371 aa6.99□□□□□ -1.29
CTNND1-227ENST00000530748 SCN8AQ9UQD0 1980 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 H0YJW9 148 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 LILRA1O75019 489 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 EVI2AP22794 236 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 C1QL4Q86Z23 238 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 MESP1Q9BRJ9 268 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 WDR83OSQ9Y284 106 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 SBF1O95248 1867 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 ANK1P16157 1881 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 DICER1Q9UPY3 1922 aaKnown RBP6.98□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV2-40A0A087WW87 121 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-227ENST00000530748 TRBV6-6A0A0A6YYG2 114 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV3D-20A0A0C4DH25 116 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV2D-40P01614 121 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-227ENST00000530748 MGST2Q99735 147 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 SLC25A39Q9BZJ4 359 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-227ENST00000530748 H0YIZ8 118 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 SLC25A20O43772 301 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 HEPN1Q6WQI6 88 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 RNF182Q8N6D2 247 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 PRADC1Q9BSG0 188 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 BUB1B-PAK6H3BSN5 160 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 SAP30O75446 220 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 SPSB3Q6PJ21 355 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
CTNND1-227ENST00000530748 MBD3L4A6NDZ8 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-227ENST00000530748 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-227ENST00000530748 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 MBD3L5A6NJ08 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-227ENST00000530748 LDLRAD4O15165 306 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 B3GALT5-AS1P59052 145 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 LAGE3Q14657 143 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 MBD3L2Q8NHZ7 208 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-227ENST00000530748 OCC1Q8TAD7 63 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 SRD5A1P18405 259 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 NIT1Q86X76 327 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 FOXG1P55316 489 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-227ENST00000530748 Q6P435 159 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 LHFPL1Q86WI0 220 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
CTNND1-227ENST00000530748 A0A1B0GWB2 263 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 C15orf32Q32M92 178 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 SPATA31B1PQ5VZV4 182 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 DTX1Q86Y01 620 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 APOMO95445 188 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 CD33P20138 364 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 RASL11AQ6T310 242 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 RCHY1Q96PM5 261 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 GGTLC1Q9BX51 225 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 GSN-AS1Q9NRJ2 163 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 TMEM242Q9NWH2 141 aa6.97□□□□□ -1.29
CTNND1-227ENST00000530748 SCN5AQ14524 2016 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 A0A1B0GWJ7 208 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 E9PQ18 207 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 TOMM40O96008 361 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 ERVK11-1P61568 191 aa6.96□□□□□ -1.29
CTNND1-227ENST00000530748 FOXL2NBQ6ZUU3 175 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms