RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 UQCC3Q6UW78 93 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
TTC39A-216ENST00000530004 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-216ENST00000530004 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 ZFP92A6NM28 416 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 LINC01548A6NM66 108 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 CYB5BO43169 146 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 LINC00869P0C866 280 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 GATA2P23769 480 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-216ENST00000530004 RPL15P61313 204 aaKnown RBP11.29□□□□□ -0.6
TTC39A-216ENST00000530004 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
TTC39A-216ENST00000530004 C9orf152Q5JTZ5 239 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 TMEM231Q9H6L2 316 aa11.29□□□□□ -0.6
TTC39A-216ENST00000530004 IGKV1D-37A0A075B6S9 117 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 K7EIM0 57 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
TTC39A-216ENST00000530004 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-216ENST00000530004 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-216ENST00000530004 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 CDC34P49427 236 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-216ENST00000530004 ZNF90Q03938 601 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 GUK1Q16774 197 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 NARS2Q96I59 477 aaKnown RBP11.28□□□□□ -0.6
TTC39A-216ENST00000530004 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
TTC39A-216ENST00000530004 A0A1W2PPV4 95 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 G3V318 75 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 CRYBA1P05813 215 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 AKIRIN2Q53H80 203 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 Q6ZS46 218 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 TMEM68Q96MH6 324 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 LINC00052Q96N35 136 aa11.27□□□□□ -0.61
TTC39A-216ENST00000530004 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 TRGV9Q99603 122 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 EIF5A2Q9GZV4 153 aaKnown RBP11.26□□□□□ -0.61
TTC39A-216ENST00000530004 THYN1Q9P016 225 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 OR2J3O76001 311 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 CD5P06127 495 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 ZP3P21754 424 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 SELENOTP62341 195 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 Q6ZSV7 163 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 ZNF702PQ9H963 129 aa11.26□□□□□ -0.61
TTC39A-216ENST00000530004 JMJD1CQ15652 2540 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 TRAV41A0A0B4J266 112 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 KRBOX1C9JBD0 128 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 NDUFB8O95169 186 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 IGHG2P01859 326 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 HIST1H1BP16401 226 aaKnown RBP11.25□□□□□ -0.61
TTC39A-216ENST00000530004 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-216ENST00000530004 RHOBP62745 196 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 PEA15Q15121 130 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 HAGHQ16775 308 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 Q8N2B8 174 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 ZNF355PQ9NSJ1 428 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 GNG13Q9P2W3 67 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 LINC00527Q9UJ94 153 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 FBXL7Q9UJT9 491 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 S4R3C0 116 aa11.25□□□□□ -0.61
TTC39A-216ENST00000530004 TMEM218A2RU14 115 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 C9JQL5 133 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 CLN5O75503 358 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 IGLC1P0CG04 106 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 DEFA5Q01523 94 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 FAM78BQ5VT40 261 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 RARRES2Q99969 163 aa11.24□□□□□ -0.61
TTC39A-216ENST00000530004 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
TTC39A-216ENST00000530004 IGF1P05019 195 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 C19orf54Q5BKX5 351 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 NPBWR1P48145 328 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 MFAP4P55083 255 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 RHOGP84095 191 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 KLK9Q2XQG4 91 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 TIGITQ495A1 244 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
TTC39A-216ENST00000530004 DOK5Q9P104 306 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms