RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 DKK2Q9UBU2 259 aa6.4□□□□□ -1.38
VPS11-203ENST00000529545 SSR3Q9UNL2 185 aa6.4□□□□□ -1.38
VPS11-203ENST00000529545 ZNF705FA8MVS1 300 aaPredicted RBP6.39□□□□□ -1.39
VPS11-203ENST00000529545 H3BMM0 161 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 PMP2P02689 132 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 HNRNPCP07910 306 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS11-203ENST00000529545 ZNF705DP0CH99 300 aaPredicted RBP6.39□□□□□ -1.39
VPS11-203ENST00000529545 ZNF705BP0CI00 300 aaPredicted RBP6.39□□□□□ -1.39
VPS11-203ENST00000529545 OPRK1P41145 380 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 AQP4P55087 323 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 OXA1LQ15070 435 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 SPINK9Q5DT21 86 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 FAM222AQ5U5X8 452 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 TMEM88Q6PEY1 159 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 GSG1LQ6UXU4 331 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 ZNF705AQ6ZN79 300 aaPredicted RBP6.39□□□□□ -1.39
VPS11-203ENST00000529545 C6orf223Q8N319 242 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 C15orf53Q8NAA6 179 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 OR5H6Q8NGV6 325 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 OR4X1Q8NH49 305 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 Q8WTZ3 238 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 SLC25A38Q96DW6 304 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 ENY2Q9NPA8 101 aa6.39□□□□□ -1.39
VPS11-203ENST00000529545 NACAE9PAV3 2078 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 SMIM31A0A1B0GVY4 71 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 FAM90A26D6RGX4 464 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 HBE1P02100 147 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 HLA-DRB4P13762 266 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 DAD1P61803 113 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 TSPAN5P62079 268 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 MXD1Q05195 221 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 TIGITQ495A1 244 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 C16orf54Q6UWD8 224 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 TBC1D26Q86UD7 250 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 MRGPRFQ96AM1 343 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 S100A16Q96FQ6 103 aaKnown RBP6.38□□□□□ -1.39
VPS11-203ENST00000529545 FAM210AQ96ND0 272 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 C7orf50Q9BRJ6 194 aaKnown RBP6.38□□□□□ -1.39
VPS11-203ENST00000529545 YTHDF1Q9BYJ9 559 aaKnown RBP6.38□□□□□ -1.39
VPS11-203ENST00000529545 FXYD6Q9H0Q3 95 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 NRN1Q9NPD7 142 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 GOLT1BQ9Y3E0 138 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 HLA-DRB4X5D2U9 266 aa6.38□□□□□ -1.39
VPS11-203ENST00000529545 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 RPS10-NUDT3A0A1W2PQS6 291 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 INS-IGF2F8WCM5 200 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 GSTZ1O43708 216 aaPredicted RBP6.37□□□□□ -1.39
VPS11-203ENST00000529545 ATG12O94817 140 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 IGKV3-20P01619 116 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 SMIM18P0DKX4 95 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 RNASE2P10153 161 aaKnown RBP6.37□□□□□ -1.39
VPS11-203ENST00000529545 PSMB9P28065 219 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 SDC2P34741 201 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 NKX2-1P43699 371 aaPredicted RBP6.37□□□□□ -1.39
VPS11-203ENST00000529545 RPL5P46777 297 aaKnown RBP6.37□□□□□ -1.39
VPS11-203ENST00000529545 AKR1C2P52895 323 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 TAS2R20P59543 309 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 GLMPQ8WWB7 406 aa6.37□□□□□ -1.39
VPS11-203ENST00000529545 RBM38Q9H0Z9 239 aaKnown RBP6.37□□□□□ -1.39
VPS11-203ENST00000529545 YTHDF2Q9Y5A9 579 aaKnown RBP6.37□□□□□ -1.39
VPS11-203ENST00000529545 LOC102723971A0A1B0GUV8 181 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 A0A1B0GVG6 124 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 RGS13O14921 159 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 IGKV1-39P01597 117 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 IGKV1-17P01599 117 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 IGKV1D-39P04432 117 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 ID1P41134 155 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 ETV6P41212 452 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 FXYD7P58549 80 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 RRN3P1Q2M238 152 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 SIGLEC15Q6ZMC9 328 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 OR1S2Q8NGQ3 325 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 CNBD2Q96M20 576 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 VCX3BQ9H321 246 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
VPS11-203ENST00000529545 VCX3AQ9NNX9 186 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 MRPL36Q9P0J6 103 aaKnown RBP6.36□□□□□ -1.39
VPS11-203ENST00000529545 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
VPS11-203ENST00000529545 LRP1BQ9NZR2 4599 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 TMEM127O75204 238 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 IL4P05112 153 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 CLEC2LP0C7M8 214 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 SLC25A4P12235 298 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 NAT1P18440 290 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 OR10J1P30954 320 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 PRSS3P35030 304 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 HRH1P35367 487 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 NUP62P37198 522 aaPredicted RBP6.35□□□□□ -1.39
VPS11-203ENST00000529545 HSPA13P48723 471 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 CCL18P55774 89 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 YPEL3P61236 119 aaPredicted RBP6.35□□□□□ -1.39
VPS11-203ENST00000529545 DHODHQ02127 395 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 IZUMO4Q1ZYL8 232 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 TMEM69Q5SWH9 247 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 SPATA31B1PQ5VZV4 182 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 IZUMO2Q6UXV1 221 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 FOXI2Q6ZQN5 318 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 OR4B1Q8NGF8 309 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 COQ8AQ8NI60 647 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms