RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 ZNF320A2RRD8 509 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 SEC14L6B5MCN3 397 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 E5RGE8 158 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 LGALS9O00182 355 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 CST7O76096 145 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 IGKV1-17P01599 117 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 GIPP09681 153 aaPredicted RBP10.68□□□□□ -0.7
USF1-209ENST00000529476 IGLC1P0CG04 106 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 OR10J1P30954 320 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 RELQ04864 619 aaPredicted RBP10.68□□□□□ -0.7
USF1-209ENST00000529476 OXLD1Q5BKU9 147 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 IL34Q6ZMJ4 242 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 REC114Q7Z4M0 266 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 TMEM252Q8N6L7 170 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 OR10P1Q8NGE3 313 aa10.68□□□□□ -0.7
USF1-209ENST00000529476 IGHV3OR16-8A0A075B7F1 116 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 TRAV30A0A087WSZ9 112 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 TRAV14DV4A0A0A6YYC5 116 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 G3V4G9 280 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 NDUFA4O00483 81 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 PET100P0DJ07 73 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 EDN2P20800 178 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 P2RY1P47900 373 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 OR1S2Q8NGQ3 325 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 CHAC2Q8WUX2 184 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 MCRIP2Q9BUT9 160 aaKnown RBP10.67□□□□□ -0.7
USF1-209ENST00000529476 MBD2Q9UBB5 411 aa10.67□□□□□ -0.7
USF1-209ENST00000529476 IGKV1D-37A0A075B6S9 117 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 SMCO3A2RU48 225 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 SCGB2A1O75556 95 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 YIF1AO95070 293 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 CSN3P07498 182 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 SULT1A1P50225 295 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 DLK1P80370 383 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 AKR1C1Q04828 323 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 Q5BKY6 102 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 ZNF600Q6ZNG1 722 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 TMEM217Q8N7C4 229 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 ASB13Q8WXK3 278 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 C20orf24Q9BUV8 137 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 ELOVL1Q9BW60 279 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 PEMTQ9UBM1 199 aa10.66□□□□□ -0.7
USF1-209ENST00000529476 PUS1Q9Y606 427 aaKnown RBP eCLIP10.66□□□□□ -0.7
USF1-209ENST00000529476 IGKV1OR2-108A0A075B7D4 117 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 TMEM213A2RRL7 107 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 C2orf70A6NJV1 201 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 ZFP92A6NM28 416 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 A8MWP6 167 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 ZNF207O43670 478 aaKnown RBP10.65□□□□□ -0.7
USF1-209ENST00000529476 SAP30O75446 220 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 RAP2BP61225 183 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 SLC38A11Q08AI6 406 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 C9orf66Q5T8R8 295 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 SAMD5Q5TGI4 173 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 TOMM20LQ6UXN7 152 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 STX12Q86Y82 276 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 THAP8Q8NA92 274 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 THAP6Q8TBB0 222 aa10.65□□□□□ -0.7
USF1-209ENST00000529476 LYL1P12980 280 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
USF1-209ENST00000529476 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
USF1-209ENST00000529476 NHLH2Q02577 135 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 ZNF90Q03938 601 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 TMEM144Q7Z5S9 345 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 OR2T35Q8NGX2 323 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 GGACTQ9BVM4 153 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 SLC25A31Q9H0C2 315 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
USF1-209ENST00000529476 hCG_2014768A0A024R1R8 64 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 FNDC10F2Z333 226 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 SCAF4O95104 1147 aaKnown RBP10.63□□□□□ -0.71
USF1-209ENST00000529476 TOMM40O96008 361 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 RD3LP0DJH9 198 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 FOLR2P14207 255 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 CBLN1P23435 193 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 S100A11P31949 105 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 ELLP55199 621 aaPredicted RBP10.63□□□□□ -0.71
USF1-209ENST00000529476 FGL1Q08830 312 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 Q8WTZ3 238 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 TRGV9Q99603 122 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 GPR61Q9BZJ8 451 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 NPVFQ9HCQ7 196 aa10.63□□□□□ -0.71
USF1-209ENST00000529476 DAZ1Q9NQZ3 744 aaKnown RBP10.63□□□□□ -0.71
USF1-209ENST00000529476 G3V3Q6 166 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 K7EMT4 169 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 PSG1P11464 419 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 RPL12P30050 165 aaKnown RBP10.62□□□□□ -0.71
USF1-209ENST00000529476 INSL3P51460 131 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 HBG1P69891 147 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 HBG2P69892 147 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 BAXQ07812 192 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 OR2F1Q13607 317 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 SIGLEC8Q9NYZ4 499 aa10.62□□□□□ -0.71
USF1-209ENST00000529476 SELENOKQ9Y6D0 94 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms