RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PGPA6NDG6 321 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 HSPE1P61604 102 aaKnown RBP14.77□□□□□ -0.04
LTBP3-210ENST00000528516 NABP2Q9BQ15 211 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 SFXN3Q9BWM7 321 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 LINC00470Q9BZP3 86 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 WDR83OSQ9Y284 106 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 PPIAL4EA0A075B759 164 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 PPIAL4DF5H284 164 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 MMP23AO75900 390 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 PPIAL4FP0DN26 164 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 RPL8P62917 257 aaKnown RBP14.77□□□□□ -0.04
LTBP3-210ENST00000528516 C10orf55Q5SWW7 151 aa14.77□□□□□ -0.04
LTBP3-210ENST00000528516 SSBP4Q9BWG4 385 aaPredicted RBP14.77□□□□□ -0.04
LTBP3-210ENST00000528516 FAM181BA6NEQ2 426 aa14.77□□□□□ -0.05
LTBP3-210ENST00000528516 ACP1P24666 158 aa14.77□□□□□ -0.05
LTBP3-210ENST00000528516 COX19Q49B96 90 aa14.77□□□□□ -0.05
LTBP3-210ENST00000528516 TMEM136Q6ZRR5 245 aa14.77□□□□□ -0.05
LTBP3-210ENST00000528516 CHRDL1Q9BU40 450 aa14.77□□□□□ -0.05
LTBP3-210ENST00000528516 PRNDQ9UKY0 176 aa14.77□□□□□ -0.05
LTBP3-210ENST00000528516 LY6G6EA0A0G2JKS1 128 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 LOC389332A0A1B0GUA5 103 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 C12orf54Q6X4T0 127 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 PRSS3P2Q8NHM4 247 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 SPSB4Q96A44 273 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 TMUB1Q9BVT8 246 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 U3KQA8 63 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 FOXH1O75593 365 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 CX3CL1P78423 397 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 MLANAQ16655 118 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 PAXXQ9BUH6 204 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 TMEM167BQ9NRX6 74 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 USP9XQ93008 2570 aaPredicted RBP14.76□□□□□ -0.05
LTBP3-210ENST00000528516 ZNF785A8K8V0 405 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 SCGB2A1O75556 95 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 OR9G9P0C7N8 305 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 STAG3L2P0CL84 134 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 STAG3L3P0CL85 134 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 ARF6P62330 175 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 WDR82Q6UXN9 313 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 PRNTQ86SH4 94 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 OR8B3Q8NGG8 313 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 TMEM70Q9BUB7 260 aa14.76□□□□□ -0.05
LTBP3-210ENST00000528516 SRSF7Q16629 238 aaKnown RBP eCLIP14.75□□□□□ -0.05
LTBP3-210ENST00000528516 Q6ZSR3 168 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 MIR17HGQ75NE6 70 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 MCRIP2Q9BUT9 160 aaKnown RBP14.75□□□□□ -0.05
LTBP3-210ENST00000528516 SEPSECSQ9HD40 501 aaKnown RBP14.75□□□□□ -0.05
LTBP3-210ENST00000528516 SAP30O75446 220 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 SSX8Q7RTT4 187 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 PMCHL2Q9BQD1 86 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 NAA38Q9BRA0 125 aaKnown RBP14.75□□□□□ -0.05
LTBP3-210ENST00000528516 V9GYV3 84 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 TMEM45BQ96B21 275 aa14.75□□□□□ -0.05
LTBP3-210ENST00000528516 PSG9Q00887 426 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 DAZAP2Q15038 168 aaPredicted RBP14.74□□□□□ -0.05
LTBP3-210ENST00000528516 OR10W1Q8NGF6 305 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 NCOR1P1Q9H4R4 102 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 DLX1P56177 255 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 MORN2Q502X0 79 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 FOXL2NBQ6ZUU3 175 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 COL8A2P25067 703 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 LINC01560Q8TB33 94 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 ZNF714Q96N38 554 aa14.74□□□□□ -0.05
LTBP3-210ENST00000528516 FNDC4Q9H6D8 234 aaPredicted RBP14.74□□□□□ -0.05
LTBP3-210ENST00000528516 SH2D7A6NKC9 451 aaPredicted RBP14.73□□□□□ -0.05
LTBP3-210ENST00000528516 Q8NFD4 153 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 ADTRPQ96IZ2 230 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 FREM2Q5SZK8 3169 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 A0A087X0K7 114 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 IGHV3-49A0A0A0MS15 119 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 LINC00473A8K010 186 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 KHDC1LQ5JSQ8 128 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 PRR7Q8TB68 274 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 C18orf32Q8TCD1 76 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 TMEM191AQ9H0A3 160 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 GNG7O60262 68 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 RPL24P83731 157 aaKnown RBP14.73□□□□□ -0.05
LTBP3-210ENST00000528516 SLAQ13239 276 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 ZNF497Q6ZNH5 498 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 FA2HQ7L5A8 372 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 SNRNP40Q96DI7 357 aaKnown RBP14.73□□□□□ -0.05
LTBP3-210ENST00000528516 P01737 135 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 CD3EP07766 207 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 OR5AL1P0C617 328 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 EBLN2Q6P2I7 272 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 TREML4Q6UXN2 200 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 OR9G1Q8NH87 305 aa14.73□□□□□ -0.05
LTBP3-210ENST00000528516 FGF23Q9GZV9 251 aaPredicted RBP14.73□□□□□ -0.05
LTBP3-210ENST00000528516 PEF1Q9UBV8 284 aaKnown RBP14.73□□□□□ -0.05
LTBP3-210ENST00000528516 C15orf62A8K5M9 175 aa14.72□□□□□ -0.05
LTBP3-210ENST00000528516 SLC35E4Q6ICL7 350 aa14.72□□□□□ -0.05
LTBP3-210ENST00000528516 GGTLC1Q9BX51 225 aa14.72□□□□□ -0.05
LTBP3-210ENST00000528516 MPDU1O75352 247 aa14.72□□□□□ -0.05
LTBP3-210ENST00000528516 GOSR1O95249 250 aa14.72□□□□□ -0.05
LTBP3-210ENST00000528516 PGLYRP4Q96LB8 373 aa14.72□□□□□ -0.05
LTBP3-210ENST00000528516 AHRRA9YTQ3 701 aa14.71□□□□□ -0.05
LTBP3-210ENST00000528516 TAX1BP3O14907 124 aa14.71□□□□□ -0.05
LTBP3-210ENST00000528516 IGLV2-14P01704 120 aa14.71□□□□□ -0.05
LTBP3-210ENST00000528516 IGHV3-23P01764 117 aa14.71□□□□□ -0.05
LTBP3-210ENST00000528516 NHLH1Q02575 133 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms