RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DCHS1Q96JQ0 3298 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 TMEM189A5PLL7 270 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 OR5H14A6NHG9 310 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 H3BSA7 217 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 J3KT08 172 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 WISP3O95389 354 aaPredicted RBP3.78□□□□□ -1.8
PCF11-202ENST00000528336 IGLV2-23P01705 113 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 HLA-DPB1P04440 258 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 RBP1P09455 135 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 RPS4Y1P22090 263 aaKnown RBP3.78□□□□□ -1.8
PCF11-202ENST00000528336 PIGPP57054 158 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 HERVK_113P63121 156 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 KRTAP13-3Q3SY46 172 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 TIFABQ6ZNK6 161 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 NUP35Q8NFH5 326 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 OR2M3Q8NG83 312 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 OR5A1Q8NGJ0 315 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 OR2T27Q8NH04 317 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 TWIST2Q8WVJ9 160 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 CANT1Q8WVQ1 401 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 TIMM17AQ99595 171 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 HSD17B10Q99714 261 aaKnown RBP3.78□□□□□ -1.8
PCF11-202ENST00000528336 C20orf27Q9GZN8 174 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 GTSF1LQ9H1H1 148 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 COA4Q9NYJ1 87 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 CEP295Q9C0D2 2601 aa3.78□□□□□ -1.8
PCF11-202ENST00000528336 PCNX2A6NKB5 2137 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 TRAV4A0A0B4J268 109 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 TMEM72A0PK05 275 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 MRASO14807 208 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 TNFSF13O75888 250 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 SHBGP04278 402 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 SCGB1C2P0DMR2 95 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 RPL7P18124 248 aaKnown RBP3.77□□□□□ -1.81
PCF11-202ENST00000528336 IMPA1P29218 277 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 SRIP30626 198 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 POLR2HP52434 150 aaKnown RBP3.77□□□□□ -1.81
PCF11-202ENST00000528336 EMP1P54849 157 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 LINC00313P59037 77 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 PSG9Q00887 426 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 EMX2Q04743 252 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 ZNF616Q08AN1 781 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 FABP9Q0Z7S8 132 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 BAMBIQ13145 260 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 LTC4SQ16873 150 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 MORN2Q502X0 79 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
PCF11-202ENST00000528336 EXOC3-AS1Q8N2X6 119 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 OR1J4Q8NGS1 313 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 SCGB1C1Q8TD33 95 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 LCN9Q8WX39 176 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 THTPAQ9BU02 230 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 ZNF331Q9NQX6 463 aaPredicted RBP3.77□□□□□ -1.81
PCF11-202ENST00000528336 SPEGQ15772 3267 aa3.77□□□□□ -1.81
PCF11-202ENST00000528336 TRBV19A0A075B6N1 114 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 IGHV1-69-2A0A0G2JMI3 117 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 A0A0X1KG70 313 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 TMEM269A0A1B0GVZ9 245 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 CCDC160A6NGH7 325 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 A8MT66 165 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 FAM25AB3EWG3 89 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 FAM25CB3EWG5 89 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 FAM25GB3EWG6 89 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 C4orf51C9J302 202 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 SMIM6P0DI80 62 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 RAP1AP62834 184 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 CCSMST1Q4G0I0 132 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 HES3Q5TGS1 186 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 MARCH3Q86UD3 253 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 OR4E2Q8NGC2 313 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 MBD3L1Q8WWY6 194 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 TCEAL7Q9BRU2 100 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 GPR84Q9NQS5 396 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 CALML5Q9NZT1 146 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 TAAR3PQ9P1P4 343 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 ASXL3Q9C0F0 2248 aa3.76□□□□□ -1.81
PCF11-202ENST00000528336 PIKFYVEQ9Y2I7 2098 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 KNTC1P50748 2209 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 IGHV5-10-1A0A0J9YXX1 117 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 TLCD2A6NGC4 264 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 M0R381 172 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 DEDDO75618 318 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 TNFSF15O95150 251 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 FAM107AO95990 144 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 UBBP0CG47 229 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 GABRA3P34903 492 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 ATP5G3P48201 142 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 KLF3P57682 345 aaPredicted RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 RRAS2P62070 204 aaPredicted RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 PPP1CAP62136 330 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 EIF3IQ13347 325 aaKnown RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 SCGB2B2Q4G0G5 96 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 MRPL2Q5T653 305 aaKnown RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 PRSS54Q6PEW0 395 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 HAGHLQ6PII5 290 aaPredicted RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 CROCCP2Q86T23 111 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms