RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 LSM4Q9Y4Z0 139 aaKnown RBP8.05□□□□□ -1.12
SF3B2-206ENST00000528302 PRSS46E5RG02 174 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 CCL3L1P16619 93 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 SELENOTP62341 195 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 DEFB109BQ30KR1 87 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 C1orf174Q8IYL3 243 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 MDS2Q8NDY4 140 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 H1FXQ92522 213 aaKnown RBP8.05□□□□□ -1.12
SF3B2-206ENST00000528302 C20orf144Q9BQM9 153 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 SPRY4Q9C004 299 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 LAMTOR2Q9Y2Q5 125 aa8.05□□□□□ -1.12
SF3B2-206ENST00000528302 ISLRO14498 428 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 ENSAO43768 121 aaKnown RBP8.04□□□□□ -1.12
SF3B2-206ENST00000528302 S100A7P31151 101 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 INO80CQ6PI98 192 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-206ENST00000528302 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 NPIPB3Q92617 1050 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 KCNS1Q96KK3 526 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 OR8B2Q96RD0 313 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 RNF2Q99496 336 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 SLC45A2Q9UMX9 530 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 TRGV10A0A0A0MS01 117 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 C20orf202A1L168 122 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 M0QZK8 103 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 MGST3O14880 152 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 CX3CL1P78423 397 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 NIT1Q86X76 327 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 CACNG8Q8WXS5 425 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 NDUFB8O95169 186 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 GDF5OSQ5U4N7 250 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 STUMQ69YW2 141 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 Q71RC1 249 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-206ENST00000528302 Q8N976 141 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 TMEM178AQ8NBL3 297 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 OR5B3Q8NH48 314 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 IGFBPL1Q8WX77 278 aa8.04□□□□□ -1.12
SF3B2-206ENST00000528302 CBY3A6NI87 242 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 COX7A2P2O60397 106 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 SAA1P0DJI8 122 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-206ENST00000528302 IGLC2P0DOY2 106 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 IGLC3P0DOY3 106 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 OR4B1Q8NGF8 309 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 OR1B1Q8NGR6 318 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 RNASE8Q8TDE3 154 aaKnown RBP8.03□□□□□ -1.12
SF3B2-206ENST00000528302 HARBI1Q96MB7 349 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 ZNF48Q96MX3 618 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-206ENST00000528302 COMMD5Q9GZQ3 224 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 JPT1Q9UK76 154 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 AMMECR1Q9Y4X0 333 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-206ENST00000528302 ARHGAP32A7KAX9 2087 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 hDV102S1A0JD36 115 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 HIGD1CA8MV81 97 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 CCL25O15444 150 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 AMY1AP04745 511 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 VAMP3Q15836 100 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 C17orf58Q2M2W7 97 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 BHLHA15Q7RTS1 189 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-206ENST00000528302 RBMXL3Q8N7X1 1067 aaKnown RBP8.03□□□□□ -1.12
SF3B2-206ENST00000528302 CORO2AQ92828 525 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 PERPQ96FX8 193 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 SFXN3Q9BWM7 321 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 UQCR10Q9UDW1 63 aa8.03□□□□□ -1.12
SF3B2-206ENST00000528302 TRAV8-1A0A0A6YYK1 113 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 MUC21A0A0G2JKD1 596 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 MUC21A0A140T8X8 626 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 TEX50A0A1B0GTY4 177 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 SCGB2A1O75556 95 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 MUC21Q5SSG8 566 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 RUSC1-AS1Q66K80 236 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 EBLN2Q6P2I7 272 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 ZNF841Q6ZN19 808 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 FAM90A1Q86YD7 464 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 C18orf32Q8TCD1 76 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 PGLYRP4Q96LB8 373 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 GNB1LQ9BYB4 327 aa8.02□□□□□ -1.12
SF3B2-206ENST00000528302 MRPL36Q9P0J6 103 aaKnown RBP8.02□□□□□ -1.12
SF3B2-206ENST00000528302 SRRM5B3KS81 715 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 IGKV3-15P01624 115 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 SLC25A5P05141 298 aaKnown RBP8.02□□□□□ -1.13
SF3B2-206ENST00000528302 AREGP15514 252 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 PRR20EP86478 221 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 PRR20CP86479 221 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 PRR20DP86480 221 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 PRR20BP86481 221 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 PRR20AP86496 221 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 FLYWCH2Q96CP2 140 aaKnown RBP8.02□□□□□ -1.13
SF3B2-206ENST00000528302 MRPL20Q9BYC9 149 aaKnown RBP8.02□□□□□ -1.13
SF3B2-206ENST00000528302 TMEM167BQ9NRX6 74 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 PTPRBP23467 1997 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 C21orf140B9A014 251 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 SAP30O75446 220 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 C22orf34Q6ZV56 151 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 SPATA12Q7Z6I5 190 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 SPACA3Q8IXA5 215 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 NUP35Q8NFH5 326 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 NUDT10Q8NFP7 164 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 NUDT11Q96G61 164 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 ZNF835Q9Y2P0 537 aa8.02□□□□□ -1.13
SF3B2-206ENST00000528302 IGLV2-8P01709 118 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms