RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 CTSGP08311 255 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 PET100P0DJ07 73 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 C4BPBP20851 252 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 ADMP35318 185 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 APOC4P55056 127 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 SP6Q3SY56 376 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 TMEM268Q5VZI3 342 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 GGNBP1Q5YKI7 109 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 SELENOHQ8IZQ5 122 aaKnown RBP10.59□□□□□ -0.71
CAPN1-212ENST00000527887 UBAC2Q8NBM4 344 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 CACFD1Q9UGQ2 172 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
CAPN1-212ENST00000527887 DNAH1Q9P2D7 4330 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 A0A1B0GU03 582 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 G3V3Q6 166 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 I3L2K1 104 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 ADAP1O75689 374 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 SIX6O95475 246 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 CD5P06127 495 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 HOXB5P09067 269 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 NMSQ5H8A3 153 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 Q6ZWC4 215 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 LYZL2Q7Z4W2 148 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 WFDC3Q8IUB2 231 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 OR10C1Q96KK4 312 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 C20orf24Q9BUV8 137 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 SMPXQ9UHP9 88 aa10.58□□□□□ -0.72
CAPN1-212ENST00000527887 IGHV3-21A0A0B4J1V1 117 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 KIR2DL5BA0A0G2JN68 375 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 KIR2DL5BA0A0G2JPC4 375 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 JTBO76095 146 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 BMI1P35226 326 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 NPBWR1P48145 328 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 IAH1Q2TAA2 248 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-212ENST00000527887 KIR2DL5AQ8N109 375 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 SLC35G3Q8N808 338 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 KIR2DL5BQ8NHK3 375 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 PPP1R1CQ8WVI7 109 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 OVOL2Q9BRP0 275 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
CAPN1-212ENST00000527887 FAM25EA8MYX2 175 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 CORTO00230 105 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 CCSO14618 274 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 MPC2O95563 127 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 MT-CO2P00403 227 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 RLN2P04090 185 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 SNCAP37840 140 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 SUB1P53999 127 aaKnown RBP eCLIP10.56□□□□□ -0.72
CAPN1-212ENST00000527887 ZBTB8BQ8NAP8 495 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-212ENST00000527887 THAP6Q8TBB0 222 aa10.56□□□□□ -0.72
CAPN1-212ENST00000527887 RRNAD1Q96FB5 475 aaKnown RBP10.56□□□□□ -0.72
CAPN1-212ENST00000527887 TRAV14DV4A0A0A6YYC5 116 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 CHEK1O14757 476 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 GNG7O60262 68 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 YIF1AO95070 293 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 P0C879 139 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 AKR1C2P52895 323 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 PRSS54Q6PEW0 395 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 OR11H4Q8NGC9 324 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 OR4D5Q8NGN0 318 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 GINS3Q9BRX5 216 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 RHPN1-AS1Q9BWJ2 59 aa10.55□□□□□ -0.72
CAPN1-212ENST00000527887 MPTX1A8MV57 137 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 FAM90A26D6RGX4 464 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 PITX3O75364 302 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 IFNA17P01571 189 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 IGKV1-5P01602 117 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-212ENST00000527887 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 ID3Q02535 119 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 ZNF345Q14585 488 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 ODF3L2Q3SX64 289 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 Q5BKY6 102 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 PVRIGQ6DKI7 326 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 ZNF546Q86UE3 836 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 C9orf62Q8N4C0 152 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 STPG3Q8N7X2 389 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 PRR13Q9NZ81 148 aa10.54□□□□□ -0.72
CAPN1-212ENST00000527887 A0A0D9SG52 128 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 ST8SIA3O43173 380 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 SPRY2O43597 315 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 ZNF207O43670 478 aaKnown RBP10.53□□□□□ -0.72
CAPN1-212ENST00000527887 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 TNFRSF9Q07011 255 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 OR2F1Q13607 317 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 SMCO1Q147U7 214 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 AARDQ4LEZ3 155 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
CAPN1-212ENST00000527887 RNF2Q99496 336 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 ENY2Q9NPA8 101 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 TNFSF18Q9UNG2 199 aa10.53□□□□□ -0.72
CAPN1-212ENST00000527887 IGHV3OR16-8A0A075B7F1 116 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 SMLR1H3BR10 107 aa10.52□□□□□ -0.73
CAPN1-212ENST00000527887 DEDDO75618 318 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms