RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 ZMAT4Q9H898 229 aa10.08□□□□□ -0.8
CAPN1-209ENST00000527469 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
CAPN1-209ENST00000527469 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
CAPN1-209ENST00000527469 STAB2Q8WWQ8 2551 aa10.08□□□□□ -0.8
CAPN1-209ENST00000527469 OR4C46A6NHA9 309 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 OR11H12B2RN74 326 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 SCGB1D2O95969 90 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 CD7P09564 240 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 ASAH1Q13510 395 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 Q8WTZ3 238 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 MITD1Q8WV92 249 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 METTL26Q96S19 204 aa10.07□□□□□ -0.8
CAPN1-209ENST00000527469 SPAG8Q99932 426 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-209ENST00000527469 MRPL36Q9P0J6 103 aaKnown RBP10.07□□□□□ -0.8
CAPN1-209ENST00000527469 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 A0A1W2PS18 150 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 FAM25EA8MYX2 175 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 UPK1BO75841 260 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 NPPCP23582 126 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 GPX4P36969 197 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-209ENST00000527469 NKX2-1P43699 371 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-209ENST00000527469 RPL11P62913 178 aaKnown RBP10.06□□□□□ -0.8
CAPN1-209ENST00000527469 PAFAH1B2P68402 229 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 IAH1Q2TAA2 248 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-209ENST00000527469 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 TMEM170AQ8WVE7 144 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 NPIPB3Q92617 1050 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 GSKIPQ9P0R6 139 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
CAPN1-209ENST00000527469 U3KQK5 164 aa10.06□□□□□ -0.8
CAPN1-209ENST00000527469 IGKV3-7A0A075B6H7 116 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 ZFP92A6NM28 416 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 A8MZ25 164 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 CHEK1O14757 476 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 TSPAN4O14817 238 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 SSSCA1O60232 199 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 CD5P06127 495 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 FABP1P07148 127 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 IGLC1P0CG04 106 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 DEFA1P59665 94 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 DEFA3P59666 94 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 SPANXN5Q5MJ07 72 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 DEFB125Q8N687 156 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 ZNF431Q8TF32 576 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-209ENST00000527469 GRAMD2BQ96HH9 432 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 RNF2Q99496 336 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 SRD5A3Q9H8P0 318 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 ZFAND3Q9H8U3 227 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 C19orf73Q9NVV2 129 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 TBC1D24Q9ULP9 559 aa10.05□□□□□ -0.8
CAPN1-209ENST00000527469 IGHV3-66A0A0C4DH42 116 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 C5orf51A6NDU8 294 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 H3BP45 60 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 IGKV1-17P01599 117 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 TFPI2P48307 235 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-209ENST00000527469 POLR2GP62487 172 aaKnown RBP eCLIP10.04□□□□□ -0.8
CAPN1-209ENST00000527469 TCF24Q7RTU0 167 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 SEC22CQ9BRL7 303 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 TENM3Q9P273 2699 aa10.04□□□□□ -0.8
CAPN1-209ENST00000527469 MPTX1A8MV57 137 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-209ENST00000527469 IL4P05112 153 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
CAPN1-209ENST00000527469 ID3Q02535 119 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 GBGT1Q8N5D6 347 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 C12orf45Q8N5I9 185 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-209ENST00000527469 ZBTB8BQ8NAP8 495 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-209ENST00000527469 OR4D5Q8NGN0 318 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 ST8SIA2Q92186 375 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 GPN1Q9HCN4 374 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-209ENST00000527469 PSENENQ9NZ42 101 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 PFDN2Q9UHV9 154 aa10.03□□□□□ -0.8
CAPN1-209ENST00000527469 TOMM40O96008 361 aa10.02□□□□□ -0.81
CAPN1-209ENST00000527469 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
CAPN1-209ENST00000527469 GAMTQ14353 236 aa10.02□□□□□ -0.81
CAPN1-209ENST00000527469 RCHY1Q96PM5 261 aa10.02□□□□□ -0.81
CAPN1-209ENST00000527469 SPATA25Q9BR10 227 aa10.02□□□□□ -0.81
CAPN1-209ENST00000527469 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
CAPN1-209ENST00000527469 UBQLN2Q9UHD9 624 aa10.02□□□□□ -0.81
CAPN1-209ENST00000527469 NBEAL2Q6ZNJ1 2754 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 SMCO3A2RU48 225 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 L7N2F9 121 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 CCSO14618 274 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 DFFBO76075 338 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 APOHP02749 345 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-209ENST00000527469 HNRNPCP07910 306 aaKnown RBP eCLIP10.01□□□□□ -0.81
CAPN1-209ENST00000527469 NUP62P37198 522 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-209ENST00000527469 VAMP2P63027 116 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 AKR1C1Q04828 323 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 HAGHQ16775 308 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 OR8G2PQ6IF36 304 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 WFDC3Q8IUB2 231 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 ZNF414Q96IQ9 312 aa10.01□□□□□ -0.81
CAPN1-209ENST00000527469 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms