RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PYDC2Q56P42 97 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 LEMD1Q68G75 181 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 RNASEH2CQ8TDP1 164 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 CSTL1Q9H114 145 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 RBKSQ9H477 322 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 HSPB7Q9UBY9 170 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 SHPKQ9UHJ6 478 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 KCNIP3Q9Y2W7 256 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 BOLA1Q9Y3E2 137 aa7.66□□□□□ -1.18
PRPF40B-204ENST00000527253 TRAV30A0A087WSZ9 112 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 TRAV2A0A0B4J234 112 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 RPS10-NUDT3A0A1W2PQS6 291 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 K7EQG2 157 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 NPY1RP25929 384 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 OR10J1P30954 320 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 P2RY1P47900 373 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 CCR6P51684 374 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 YPEL3P61236 119 aaPredicted RBP7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 RPL11P62913 178 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 SMCO1Q147U7 214 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 CCDC190Q86UF4 302 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 OR1S2Q8NGQ3 325 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 NPIPB3Q92617 1050 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 SCGB3A2Q96PL1 93 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 METTL26Q96S19 204 aa7.65□□□□□ -1.18
PRPF40B-204ENST00000527253 MPTX1A8MV57 137 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 DNASE2O00115 360 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 PITX3O75364 302 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 CD5P06127 495 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 GIG44P09565 113 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 SLC25A4P12235 298 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 PAFAH1B2P68402 229 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 PMS2P11Q13670 270 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 TMED4Q7Z7H5 227 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 LGI3Q8N145 548 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 TOMM5Q8N4H5 51 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 DCANP1Q8TF63 244 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 RABAC1Q9UI14 185 aa7.64□□□□□ -1.19
PRPF40B-204ENST00000527253 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 A0A1W2PS18 150 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 CCDC160A6NGH7 325 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 KNCNA6PVL3 124 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 JTBO76095 146 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 IFNA10P01566 189 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 C16orf54Q6UWD8 224 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 STXBP6Q8NFX7 210 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 DTD1Q8TEA8 209 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 Q8WTZ3 238 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 GLMPQ8WWB7 406 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 ACY3Q96HD9 319 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 TMEM231Q9H6L2 316 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 U3KQ87 197 aa7.63□□□□□ -1.19
PRPF40B-204ENST00000527253 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 IGKV1D-37A0A075B6S9 117 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 CXorf65A6NEN9 183 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 SFT2D2O95562 160 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 TOMM40O96008 361 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 IL4P05112 153 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 HNRNPCP07910 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 ANXA3P12429 323 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 FAUP35544 74 aaKnown RBP7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 SRPXP78539 464 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 PPP1R1AQ13522 171 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 GAMTQ14353 236 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 TMEM128Q5BJH2 165 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 ETFRF1Q6IPR1 90 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 LRTM2Q8N967 370 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 OR1S1Q8NH92 325 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 GATAD1Q8WUU5 269 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 RARRES2Q99969 163 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 SRRQ9GZT4 340 aa7.62□□□□□ -1.19
PRPF40B-204ENST00000527253 DEFB4AO15263 64 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 BUB3O43684 328 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 SCGB2A1O75556 95 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 CA1P00915 261 aaPredicted RBP7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 ZNF688P0C7X2 276 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 RD3LP0DJH9 198 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 IAPPP10997 89 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 PSG1P11464 419 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 S100A5P33763 92 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 AP3S2P59780 193 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 DHRS2Q13268 280 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 BAK1Q16611 211 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 GSG1LQ6UXU4 331 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 TRPT1Q86TN4 253 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 NOXA1Q86UR1 476 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 OR51G1Q8NGK1 321 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 OR11H2Q8NH07 326 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 GRAMD2BQ96HH9 432 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 SDHCQ99643 169 aaPredicted RBP7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 SLC25A21Q9BQT8 299 aaPredicted RBP7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 CACFD1Q9UGQ2 172 aa7.61□□□□□ -1.19
PRPF40B-204ENST00000527253 DUXBA0A1W2PPF3 345 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 ZNF701M0R085 212 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 IFNA4P05014 189 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 C4BPBP20851 252 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 VAMP1P23763 118 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms