RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 SMLR1H3BR10 107 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 SCGB2A1O75556 95 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 IGLC1P0CG04 106 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-205ENST00000526954 KLF5Q13887 457 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-205ENST00000526954 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 TMEM144Q7Z5S9 345 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 OR1S2Q8NGQ3 325 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 NPVFQ9HCQ7 196 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 TNFSF18Q9UNG2 199 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 ANK2Q01484 3957 aa12.68□□□□□ -0.38
CAPN1-205ENST00000526954 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 OR2C1O95371 312 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 TSPAN15O95858 294 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 IGKV1-17P01599 117 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 PF4P02776 101 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 OR10J1P30954 320 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-205ENST00000526954 RELQ04864 619 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-205ENST00000526954 OR5C1Q8NGR4 320 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 ZNF414Q96IQ9 312 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 ZC4H2Q9NQZ6 224 aa12.67□□□□□ -0.38
CAPN1-205ENST00000526954 IGKV1D-37A0A075B6S9 117 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 IGKV1OR2-108A0A075B7D4 117 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 HMSDA8MTL9 139 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 SLURP1P55000 103 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 YPEL3P61236 119 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-205ENST00000526954 AKR1C1Q04828 323 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 LINC00482Q8N8I6 264 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 INO80EQ8NBZ0 244 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-205ENST00000526954 OR11H4Q8NGC9 324 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 TRGV9Q99603 122 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 UQCC1Q9NVA1 299 aa12.66□□□□□ -0.38
CAPN1-205ENST00000526954 SMCO3A2RU48 225 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 RNF222A6NCQ9 220 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 LGALS9O00182 355 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 NDUFA4O00483 81 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 TIGITQ495A1 244 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 TREML4Q6UXN2 200 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 ZNF600Q6ZNG1 722 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 DLX4Q92988 240 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-205ENST00000526954 NEURL2Q9BR09 285 aa12.65□□□□□ -0.38
CAPN1-205ENST00000526954 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
CAPN1-205ENST00000526954 ZFP92A6NM28 416 aa12.64□□□□□ -0.39
CAPN1-205ENST00000526954 C1QBP02746 253 aa12.64□□□□□ -0.39
CAPN1-205ENST00000526954 TEPPQ6URK8 271 aa12.64□□□□□ -0.39
CAPN1-205ENST00000526954 REC114Q7Z4M0 266 aa12.64□□□□□ -0.39
CAPN1-205ENST00000526954 WDR83OSQ9Y284 106 aa12.64□□□□□ -0.39
CAPN1-205ENST00000526954 IGHV3-35A0A0C4DH35 117 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 ARPC5O15511 151 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 DFFBO76075 338 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 TOMM40O96008 361 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 FABP1P07148 127 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 SYNJ2BPP57105 145 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 ATP5SQ99766 215 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 VWFP04275 2813 aa12.63□□□□□ -0.39
CAPN1-205ENST00000526954 OVOL1O14753 267 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 RD3LP0DJH9 198 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 ZNF90Q03938 601 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 CD300CQ08708 224 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 OR2F1Q13607 317 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 ZNF345Q14585 488 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 CLINT1Q14677 625 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 UNQ9165/PRO28630Q6UXU0 137 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 Q8WTZ3 238 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 TMEM190Q8WZ59 177 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 MFFQ9GZY8 342 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 WFDC1Q9HC57 220 aa12.62□□□□□ -0.39
CAPN1-205ENST00000526954 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 A8MWP6 167 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 K7EMT4 169 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 MPDU1O75352 247 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 PSG1P11464 419 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 ELLP55199 621 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-205ENST00000526954 TOMM20LQ6UXN7 152 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 RCC1LQ96I51 464 aaKnown RBP12.61□□□□□ -0.39
CAPN1-205ENST00000526954 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 PARD6GQ9BYG4 376 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-205ENST00000526954 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
CAPN1-205ENST00000526954 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
CAPN1-205ENST00000526954 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
CAPN1-205ENST00000526954 AGPAT2O15120 278 aa12.6□□□□□ -0.39
CAPN1-205ENST00000526954 CFDP00746 253 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-205ENST00000526954 SELENOTP62341 195 aa12.6□□□□□ -0.39
CAPN1-205ENST00000526954 RAB31Q13636 194 aa12.6□□□□□ -0.39
CAPN1-205ENST00000526954 BTNL8Q6UX41 500 aa12.6□□□□□ -0.39
CAPN1-205ENST00000526954 CYP2G1PQ6ZSU1 146 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms