RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 MFAP4P55083 255 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 CCL20P78556 96 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 GUK1Q16774 197 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 GCSAMLQ5JQS6 135 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 TOR2AQ5JU69 321 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 TMEM86BQ8N661 226 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 TXN2Q99757 166 aa16.08■□□□□ 0.16
SMCO4-203ENST00000526869 IGHV3-21A0A0B4J1V1 117 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 AP4M1O00189 453 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 HNF1AP20823 631 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 ZP3P21754 424 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 PEA15Q15121 130 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 C9orf152Q5JTZ5 239 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 OR1L4Q8NGR5 311 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 GATAD1Q8WUU5 269 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 PFDN5Q99471 154 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 TMEM160Q9NX00 188 aa16.07■□□□□ 0.16
SMCO4-203ENST00000526869 AKAP9Q99996 3911 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 PSMB11A5LHX3 300 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 G3V318 75 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 H3BUA1 57 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 NDUFB8O95169 186 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 OR5G3P0C626 314 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 ZNF90Q03938 601 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 NECAP1Q8NC96 275 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 MRPL32Q9BYC8 188 aaKnown RBP16.06■□□□□ 0.16
SMCO4-203ENST00000526869 C21orf62Q9NYP8 219 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 FBXL7Q9UJT9 491 aa16.06■□□□□ 0.16
SMCO4-203ENST00000526869 A0A1B0GV50 99 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 SCGB2A1O75556 95 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 OR2J3O76001 311 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 IFNA1P01562 189 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 STAG3L2P0CL84 134 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 STAG3L3P0CL85 134 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 SRP14P37108 136 aaKnown RBP16.05■□□□□ 0.16
SMCO4-203ENST00000526869 TAGLN2P37802 199 aaKnown RBP16.05■□□□□ 0.16
SMCO4-203ENST00000526869 PPT1P50897 306 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 PLP1P60201 277 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 BLCAPP62952 87 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 ATP6V0BQ99437 205 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 TREM1Q9NP99 234 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 YAE1D1Q9NRH1 226 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 FUT9Q9Y231 359 aa16.05■□□□□ 0.16
SMCO4-203ENST00000526869 MXRA5Q9NR99 2828 aa16.04■□□□□ 0.16
SMCO4-203ENST00000526869 RBFOX3A6NFN3 312 aa16.04■□□□□ 0.16
SMCO4-203ENST00000526869 HOXA3O43365 443 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-203ENST00000526869 IGKV1-17P01599 117 aa16.04■□□□□ 0.16
SMCO4-203ENST00000526869 GATA2P23769 480 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-203ENST00000526869 FGF8P55075 233 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-203ENST00000526869 RHOGP84095 191 aa16.04■□□□□ 0.16
SMCO4-203ENST00000526869 SRSF3P84103 164 aaKnown RBP16.04■□□□□ 0.16
SMCO4-203ENST00000526869 ZNF506Q5JVG8 444 aa16.04■□□□□ 0.16
SMCO4-203ENST00000526869 DNAJC4Q9NNZ3 241 aa16.04■□□□□ 0.16
SMCO4-203ENST00000526869 GAR1Q9NY12 217 aaKnown RBP16.04■□□□□ 0.16
SMCO4-203ENST00000526869 ELOA3CA0A087WX78 387 aaPredicted RBP16.03■□□□□ 0.16
SMCO4-203ENST00000526869 TMEM218A2RU14 115 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 FAM223BA6NKX1 122 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 COX7A2P2O60397 106 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 CXorf1O96002 111 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 PSMB3P49720 205 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 YPEL3P61236 119 aaPredicted RBP16.03■□□□□ 0.16
SMCO4-203ENST00000526869 SCGB2A2Q13296 93 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 KHDC3LQ587J8 217 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 RBMS3Q6XE24 437 aaKnown RBP16.03■□□□□ 0.16
SMCO4-203ENST00000526869 FAM223AQ8IWN6 122 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 SIGLECL1Q8N7X8 197 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 EIF5A2Q9GZV4 153 aaKnown RBP16.03■□□□□ 0.16
SMCO4-203ENST00000526869 MANBALQ9NQG1 85 aa16.03■□□□□ 0.16
SMCO4-203ENST00000526869 CSMD1Q96PZ7 3565 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 LOC102723971A0A1B0GUV8 181 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 F8W735 103 aaPredicted RBP16.02■□□□□ 0.16
SMCO4-203ENST00000526869 GNG7O60262 68 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 NDUFS6O75380 124 aaKnown RBP16.02■□□□□ 0.16
SMCO4-203ENST00000526869 TOMM40O96008 361 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 PPIFP30405 207 aaKnown RBP16.02■□□□□ 0.16
SMCO4-203ENST00000526869 TIGITQ495A1 244 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 FAM78BQ5VT40 261 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 LINC00052Q96N35 136 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 NPFFR1Q9GZQ6 430 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 SEPSECSQ9HD40 501 aaKnown RBP16.02■□□□□ 0.16
SMCO4-203ENST00000526869 TECRQ9NZ01 308 aaKnown RBP16.02■□□□□ 0.16
SMCO4-203ENST00000526869 GNG13Q9P2W3 67 aa16.02■□□□□ 0.16
SMCO4-203ENST00000526869 MYO9AB2RTY4 2548 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 BCL2P10415 239 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 TAS2R45P59539 299 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 C15orf32Q32M92 178 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 IL17RELQ6ZVW7 336 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 ZNF502Q8TBZ5 544 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 TMEM37Q8WXS4 190 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 NARS2Q96I59 477 aaKnown RBP16.01■□□□□ 0.15
SMCO4-203ENST00000526869 PRSS22Q9GZN4 317 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 TMEM231Q9H6L2 316 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 ZNF355PQ9NSJ1 428 aa16.01■□□□□ 0.15
SMCO4-203ENST00000526869 TMEM89A2RUT3 159 aa16■□□□□ 0.15
SMCO4-203ENST00000526869 HMGB3O15347 200 aaKnown RBP16■□□□□ 0.15
SMCO4-203ENST00000526869 HSPB1P04792 205 aaKnown RBP16■□□□□ 0.15
SMCO4-203ENST00000526869 RD3LP0DJH9 198 aa16■□□□□ 0.15
SMCO4-203ENST00000526869 CFHR3Q02985 330 aa16■□□□□ 0.15
SMCO4-203ENST00000526869 ICAM4Q14773 271 aa16■□□□□ 0.15
SMCO4-203ENST00000526869 HAGHQ16775 308 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms