RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 NKX2-1P43699 371 aaPredicted RBP12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 RPP30P78346 268 aaKnown RBP12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 C12orf45Q8N5I9 185 aaPredicted RBP12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 OR1S2Q8NGQ3 325 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 ENKURQ8TC29 256 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 ACY3Q96HD9 319 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 GINS3Q9BRX5 216 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 RHPN1-AS1Q9BWJ2 59 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 GSKIPQ9P0R6 139 aa12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
SSSCA1-202ENST00000526433 CHEK1O14757 476 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 CD7P09564 240 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 FRMD6-AS1P0C7T7 363 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 IGLC1P0CG04 106 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 IGHV4-30-4P0DP06 118 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 OR10J1P30954 320 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 CD81P60033 236 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 LAMTOR1Q6IAA8 161 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 ZBTB8BQ8NAP8 495 aaPredicted RBP12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
SSSCA1-202ENST00000526433 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 A8MZ25 164 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 IL5P05113 134 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 NHLRC4P0CG21 123 aaPredicted RBP12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 YPEL3P61236 119 aaPredicted RBP12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 GAMTQ14353 236 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 NRARPQ7Z6K4 114 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 Q8WTZ3 238 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 RNF2Q99496 336 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
SSSCA1-202ENST00000526433 CCSO14618 274 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 TSPAN4O14817 238 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 NPPCP23582 126 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 SMIM8Q96KF7 97 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 PSENENQ9NZ42 101 aa12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
SSSCA1-202ENST00000526433 FAM25EA8MYX2 175 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 OR11H12B2RN74 326 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 H3BP45 60 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 SSSCA1O60232 199 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 SCGB1D2O95969 90 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 PAX9P55771 341 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 DEFA1P59665 94 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 DEFA3P59666 94 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 VSIRQ9H7M9 311 aa12.15□□□□□ -0.46
SSSCA1-202ENST00000526433 C5orf51A6NDU8 294 aa12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 RD3LP0DJH9 198 aa12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 LILRB2Q8N423 598 aa12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 ST8SIA2Q92186 375 aa12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 METTL26Q96S19 204 aa12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 GPN1Q9HCN4 374 aaPredicted RBP12.14□□□□□ -0.47
SSSCA1-202ENST00000526433 IGHV3-66A0A0C4DH42 116 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 ZFP92A6NM28 416 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 TOMM40O96008 361 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 PSG1P11464 419 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 CRYBB3P26998 211 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 BMI1P35226 326 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 FAM90A2PQ658T7 463 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 TCF24Q7RTU0 167 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 C2orf50Q96LR7 162 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 HUWE1Q7Z6Z7 4374 aaKnown RBP12.13□□□□□ -0.47
SSSCA1-202ENST00000526433 IGKV1D-37A0A075B6S9 117 aa12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 A0A1W2PS18 150 aa12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 DFFBO76075 338 aa12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 GSG1LQ6UXU4 331 aa12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 MARVELD1Q9BSK0 173 aa12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 RCL1Q9Y2P8 373 aaKnown RBP12.12□□□□□ -0.47
SSSCA1-202ENST00000526433 IGKV3-7A0A075B6H7 116 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 OR4C46A6NHA9 309 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 SNRPGP15A8MWD9 76 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 IL4P05112 153 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 CD5P06127 495 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 TAS2R30P59541 319 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 ZNF90Q03938 601 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 GBGT1Q8N5D6 347 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 THAP8Q8NA92 274 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 LSM5Q9Y4Y9 91 aaKnown RBP12.11□□□□□ -0.47
SSSCA1-202ENST00000526433 U3KQE9 123 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms