RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 C18orf15Q96N68 181 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 YPEL2Q96QA6 119 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SCGB3A1Q96QR1 104 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TSPAN32Q96QS1 320 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 IMMP2LQ96T52 175 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 HBEGFQ99075 208 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CCL13Q99616 98 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CGREF1Q99674 301 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC25A21Q9BQT8 299 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 NAA38Q9BRA0 125 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF471Q9BX82 626 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 IMUPQ9GZP8 106 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CHST6Q9GZX3 395 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM222Q9H0R3 208 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CST11Q9H112 138 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SH3BGRL3Q9H299 93 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CST9LQ9H4G1 147 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RERGLQ9H628 205 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TAF9BQ9HBM6 251 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 POPDC3Q9HBV1 291 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 NIT2Q9NQR4 276 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM38BQ9NVV0 291 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RASL12Q9NYN1 266 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 IL36BQ9NZH7 164 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPL27Q9P0M9 148 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 NAT8BQ9UHF3 227 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 AK3Q9UIJ7 227 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR52A1Q9UKL2 312 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 HIGD1AQ9Y241 93 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TPRKBQ9Y3C4 175 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF337Q9Y3M9 751 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 R4GN34 69 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CRB1P82279 1406 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 WRNQ14191 1432 aaPredicted RBP eCLIP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ADGRL3Q9HAR2 1447 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RIMS2Q9UQ26 1411 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 NACADO15069 1562 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SMARCA2P51531 1590 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 DENND4AQ7Z401 1863 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CECR2Q9BXF3 1484 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TRBV19A0A075B6N1 114 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TRBV24-1A0A075B6N3 115 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TRGV10A0A0A0MS01 117 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV3-73A0A0B4J1V6 119 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PIGBOS1A0A0B4J2F0 54 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C3orf85A0A1B0GTC6 90 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PNMA8CA0A1B0GUJ8 204 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MDFIC2A0A1B0GVS7 189 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IRGMA1A4Y4 181 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM218A2RU14 115 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TLCD2A6NGC4 264 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF860A6NHJ4 632 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 HMSDA8MTL9 139 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF727A8MUV8 499 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 A8MWV9 139 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF736B4DX44 427 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 GGTLC3B5MD39 225 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 H3BMM0 161 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 J3QQQ9 107 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 M0R143 59 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 LST1O00453 97 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SDCBPO00560 298 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 FFAR1O14842 300 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SETD1AO15047 1707 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SYNMO15061 1565 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 LEPROTO15243 131 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 DLEU1O43261 78 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 NDUFA2O43678 99 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF73O43830 326 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TIMM17BO60830 172 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 LY6HO94772 140 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CPSF4O95639 269 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 EPPINO95925 133 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IFNGP01579 166 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1D-33P01593 117 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1-33P01594 117 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV1-69P01742 117 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PMP2P02689 132 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TRGC2P03986 189 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IL5P05113 134 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 LGALS1P09382 135 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CD7P09564 240 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF728P0DKX0 622 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CRYGAP11844 174 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CBR1P16152 277 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H1BP16401 226 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H1DP16402 221 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CCL1P22362 96 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 EVI2AP22794 236 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CRYGSP22914 178 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CRHBPP24387 322 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 BLVRBP30043 206 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SCN1AP35498 2009 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 G6PCP35575 357 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 FUSP35637 526 aaKnown RBP eCLIP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SNCAP37840 140 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RBP2P50120 134 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 DAPP51397 102 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 DYNLT3P51808 116 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 FOXA1P55317 472 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms