RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZNF600Q6ZNG1 722 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 OR10P1Q8NGE3 313 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 NPIPB3Q92617 1050 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 ACY3Q96HD9 319 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 UFC1Q9Y3C8 167 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 K7EMT4 169 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 MPC2O95563 127 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 METTL15P1P0C7V9 234 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 OR10J1P30954 320 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 P2RY1P47900 373 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 CAV2P51636 162 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 KPRPQ5T749 579 aaPredicted RBP15.81■□□□□ 0.12
CD44-222ENST00000526025 UNQ9165/PRO28630Q6UXU0 137 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 THAP8Q8NA92 274 aa15.81■□□□□ 0.12
CD44-222ENST00000526025 ZMAT5Q9UDW3 170 aaKnown RBP15.81■□□□□ 0.12
CD44-222ENST00000526025 H0YIZ8 118 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 CSN3P07498 182 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 GIPP09681 153 aaPredicted RBP15.8■□□□□ 0.12
CD44-222ENST00000526025 BCAP31P51572 246 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 LRRC37A5PQ49AS3 106 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 OXLD1Q5BKU9 147 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 OR8G2PQ6IF36 304 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 ACOT7LQ6ZUV0 252 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 MARC2Q969Z3 335 aa15.8■□□□□ 0.12
CD44-222ENST00000526025 DAZ1Q9NQZ3 744 aaKnown RBP15.8■□□□□ 0.12
CD44-222ENST00000526025 ZNF320A2RRD8 509 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 TMEM213A2RRL7 107 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 C2orf70A6NJV1 201 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 G3V4G9 280 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 SAP30O75446 220 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 SULT1A1P50225 295 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 EGFEM1PQ0D2K5 195 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 HAPLN4Q86UW8 402 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 STX12Q86Y82 276 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 TMEM252Q8N6L7 170 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 WDR89Q96FK6 387 aaPredicted RBP15.79■□□□□ 0.12
CD44-222ENST00000526025 OR5AC2Q9NZP5 309 aa15.79■□□□□ 0.12
CD44-222ENST00000526025 SORL1Q92673 2214 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 IGHV3-35A0A0C4DH35 117 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 FAM24AA6NFZ4 105 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 CCNKO75909 580 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 FABP1P07148 127 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 C8orf88P0DMB2 117 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 LYL1P12980 280 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 RAP2BP61225 183 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 BEAN1Q3B7T3 259 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 TIGITQ495A1 244 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 TMEM144Q7Z5S9 345 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 TRGV9Q99603 122 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 RNF126Q9BV68 326 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 SLC25A31Q9H0C2 315 aa15.78■□□□□ 0.12
CD44-222ENST00000526025 PUS1Q9Y606 427 aaKnown RBP eCLIP15.78■□□□□ 0.12
CD44-222ENST00000526025 IGKV1D-37A0A075B6S9 117 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 IGSF23A1L1A6 192 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 TOMM40O96008 361 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 HBG1P69891 147 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 HBG2P69892 147 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 BAXQ07812 192 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 FGL1Q08830 312 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 TOMM20LQ6UXN7 152 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 GINS3Q9BRX5 216 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 ZFAND3Q9H8U3 227 aa15.77■□□□□ 0.12
CD44-222ENST00000526025 MRPL27Q9P0M9 148 aaKnown RBP15.77■□□□□ 0.12
CD44-222ENST00000526025 DNAH3Q8TD57 4116 aa15.77■□□□□ 0.11
CD44-222ENST00000526025 ZFP92A6NM28 416 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 IGLV1-51P01701 117 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 FOLR2P14207 255 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 CBLN1P23435 193 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 S100A11P31949 105 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 AKR1C1Q04828 323 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 SLC38A11Q08AI6 406 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 ARL16Q0P5N6 197 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 Q6ZNX1 250 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 OR2K2Q8NGT1 345 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 Q8WTZ3 238 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 NPVFQ9HCQ7 196 aa15.76■□□□□ 0.11
CD44-222ENST00000526025 TECRQ9NZ01 308 aaKnown RBP15.76■□□□□ 0.11
CD44-222ENST00000526025 IGKV1OR2-108A0A075B7D4 117 aa15.75■□□□□ 0.11
CD44-222ENST00000526025 YIF1AO95070 293 aa15.75■□□□□ 0.11
CD44-222ENST00000526025 TM4SF20Q53R12 229 aa15.75■□□□□ 0.11
CD44-222ENST00000526025 ADAMTSL5Q6ZMM2 481 aa15.75■□□□□ 0.11
CD44-222ENST00000526025 C20orf24Q9BUV8 137 aa15.75■□□□□ 0.11
CD44-222ENST00000526025 MBD2Q9UBB5 411 aa15.75■□□□□ 0.11
CD44-222ENST00000526025 CST7O76096 145 aa15.74■□□□□ 0.11
CD44-222ENST00000526025 CFDP00746 253 aaPredicted RBP15.74■□□□□ 0.11
CD44-222ENST00000526025 RD3LP0DJH9 198 aa15.74■□□□□ 0.11
CD44-222ENST00000526025 EWSR1Q01844 656 aaKnown RBP eCLIP15.74■□□□□ 0.11
CD44-222ENST00000526025 ATP6V1FQ16864 119 aa15.74■□□□□ 0.11
CD44-222ENST00000526025 VWC2Q2TAL6 325 aa15.74■□□□□ 0.11
CD44-222ENST00000526025 THAP6Q8TBB0 222 aa15.74■□□□□ 0.11
CD44-222ENST00000526025 TRAV14DV4A0A0A6YYC5 116 aa15.73■□□□□ 0.11
CD44-222ENST00000526025 TEPPQ6URK8 271 aa15.73■□□□□ 0.11
CD44-222ENST00000526025 OR51G1Q8NGK1 321 aa15.73■□□□□ 0.11
CD44-222ENST00000526025 LSM4Q9Y4Z0 139 aaKnown RBP15.73■□□□□ 0.11
CD44-222ENST00000526025 FBN3Q75N90 2809 aa15.73■□□□□ 0.11
CD44-222ENST00000526025 SMCO3A2RU48 225 aa15.72■□□□□ 0.11
CD44-222ENST00000526025 PSG1P11464 419 aa15.72■□□□□ 0.11
CD44-222ENST00000526025 BMI1P35226 326 aa15.72■□□□□ 0.11
CD44-222ENST00000526025 TMEM217Q8N7C4 229 aa15.72■□□□□ 0.11
CD44-222ENST00000526025 DYNLRB2Q8TF09 96 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms