RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 Q6ZR03 302 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 STPG4Q8N801 248 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 CDC42EP3Q9UKI2 254 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 C2orf16Q68DN1 1984 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 A0A087X0K7 114 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 ACP1P24666 158 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 PPIFP30405 207 aaKnown RBP5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 CKS2P33552 79 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 RPL27AP46776 148 aaKnown RBP5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 ZFP36L1Q07352 338 aaKnown RBP5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 RIGQ13278 110 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 ASCL4Q6XD76 172 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 FAM168AQ92567 244 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 TMUB1Q9BVT8 246 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 MRPL20Q9BYC9 149 aaKnown RBP5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 HSPB8Q9UJY1 196 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 NOTCH2Q04721 2471 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 C7orf71A4D174 169 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 FAM90A27PA6NNH2 459 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 IGLV3-1P01715 115 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 HLA-DRB1P01911 266 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 APOHP02749 345 aaPredicted RBP5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 HTN1P15515 57 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 FBLN7Q53RD9 439 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 C12orf54Q6X4T0 127 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 TXNDC17Q9BRA2 123 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 CLEC7AQ9BXN2 247 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 ZNF430Q9H8G1 570 aaPredicted RBP5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 NGBQ9NPG2 151 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 THYN1Q9P016 225 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 NAV3Q8IVL0 2385 aa5.73□□□□□ -1.49
TGFBR3-207ENST00000525962 F5H697 171 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 H3BUT2 72 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 H3BVH4 76 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 H7C2G1 150 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 J3QR89 54 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 STAG3L2P0CL84 134 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 STAG3L3P0CL85 134 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 SAA1P0DJI8 122 aaPredicted RBP5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 RPL7P18124 248 aaKnown RBP5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 UTF1Q5T230 341 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 TMEM108Q6UXF1 575 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 SCGB1D4Q6XE38 83 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 NIT1Q86X76 327 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 VSTM2AQ8TAG5 236 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 TRAV8-6A0A0B4J262 113 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 TMEM238LA0A1B0GVL6 79 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 PEX7O00628 323 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 GFRA3O60609 400 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 GPX1P07203 203 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 TRIP6Q15654 476 aaKnown RBP5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 Q1RN00 199 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 GFRALQ6UXV0 394 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 MEGF9Q9H1U4 602 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 HIGD1AQ9Y241 93 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 LY6G6EA0A0G2JKS1 128 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 ZNF134P52741 427 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 GAGE1Q13065 139 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 TMEM136Q6ZRR5 245 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 NUDT10Q8NFP7 164 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 GUCD1Q96NT3 240 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 U3KQA8 63 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 IGF2RP11717 2491 aa5.72□□□□□ -1.49
TGFBR3-207ENST00000525962 LOC107984156A0A0G2JMH3 177 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 A6NDN8 102 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 AHRRA9YTQ3 701 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 K7EN84 100 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 HBBP68871 147 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 IGFL4Q6B9Z1 124 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 ARL17AQ8IVW1 177 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 ZNF295-AS1Q8N0V1 137 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 EXOC3-AS1Q8N2X6 119 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 NUDT11Q96G61 164 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 LOXL4Q96JB6 756 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 LINC00470Q9BZP3 86 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 IFI27L2Q9H2X8 130 aa5.71□□□□□ -1.49
TGFBR3-207ENST00000525962 IGHV2OR16-5A0A0B4J2B6 119 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 A0A1W2PS18 150 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 DLL1O00548 723 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 MMP23AO75900 390 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 TGFAP01135 160 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 SLAQ13239 276 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 SRSF9Q13242 221 aaKnown RBP eCLIP5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 KLF17Q5JT82 389 aaPredicted RBP5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 C1orf185Q5T7R7 199 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 CIARTQ8N365 385 aaPredicted RBP5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 RPRMLQ8N4K4 120 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 ZNF502Q8TBZ5 544 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 ZNF714Q96N38 554 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 JPT1Q9UK76 154 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 SONP18583 2426 aaKnown RBP5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 MAP1AP78559 2803 aaPredicted RBP5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 PPIAL4EA0A075B759 164 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 M0R296 226 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 ZNF207O43670 478 aaKnown RBP5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 PPIAL4FP0DN26 164 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 FOXL1Q12952 345 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 SPRNQ5BIV9 151 aa5.71□□□□□ -1.5
TGFBR3-207ENST00000525962 CFAP161Q6P656 301 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms