RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 A0A1B0GUL6 1792 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 TRAV30A0A087WSZ9 112 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 IGHV1OR15-9A0A0B4J2B8 117 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 LOC100130705A0A1B0GUX0 176 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 TMEM218A2RU14 115 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 LINC00862A6NCI5 91 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 TMEM212A6NML5 194 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 EPM2AB3EWF7 344 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 UBE2L6O14933 153 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 NPFFO15130 113 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 PLA2G10O15496 165 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
CD44-213ENST00000525209 NCR2O95944 276 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 IGHV3-11P01762 117 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 MT-ND4LP03901 98 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 SRP19P09132 144 aaKnown RBP3.21□□□□□ -1.9
CD44-213ENST00000525209 CD7P09564 240 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 LINC00869P0C866 280 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 IGLC6P0CF74 106 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 ZNF705DP0CH99 300 aaPredicted RBP3.21□□□□□ -1.9
CD44-213ENST00000525209 ZNF728P0DKX0 622 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 CRISP2P16562 243 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 S100A2P29034 98 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 DIO3P55073 304 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 FGF12P61328 243 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 ZNF141Q15928 474 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 RRN3P1Q2M238 152 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 ZNF876PQ49A33 203 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 NCMAPQ5T1S8 102 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 C1orf140Q5VVS0 124 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 MORN3Q6PF18 240 aaPredicted RBP3.21□□□□□ -1.9
CD44-213ENST00000525209 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 CTAGE3PQ8IX95 158 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 OR8A1Q8NGG7 326 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 OR5A2Q8NGI9 324 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 LMO3Q8TAP4 145 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 EFCAB1Q9HAE3 211 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 DEC1Q9P2X7 70 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 TP73-AS1Q9UF72 201 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 BOKQ9UMX3 212 aaPredicted RBP3.21□□□□□ -1.9
CD44-213ENST00000525209 BAIAP2Q9UQB8 552 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 MOB4Q9Y3A3 225 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 MCM3APO60318 1980 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 LTBP2Q14767 1821 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 PLXND1Q9Y4D7 1925 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 PRUNE2Q8WUY3 3088 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 MAST2Q6P0Q8 1798 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 LRRC37A2A6NM11 1700 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 IGLV1-50A0A075B6I6 118 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 IGKV1D-43A0A0B4J1Z2 117 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 GGT3PA6NGU5 568 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 IFITM10A6NMD0 228 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 IFITM5A6NNB3 132 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 GGTLC3B5MD39 225 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 TAX1BP3O14907 124 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 LYZL6O75951 148 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 PAEPP09466 180 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 HLA-EP13747 358 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 NFYBP25208 207 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 GNG4P50150 75 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 NANOS3P60323 173 aaKnown RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 TIMM10P62072 90 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 CDK6Q00534 326 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 ATP5G2Q06055 141 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 TMEM244Q5VVB8 128 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 CGB2Q6NT52 195 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 C9orf47Q6ZRZ4 202 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 SCXQ7RTU7 201 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 MSRB3Q8IXL7 192 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 ZNF440Q8IYI8 595 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 H1FOOQ8IZA3 346 aaPredicted RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 RPP25LQ8N5L8 163 aaKnown RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 OR4S1Q8NGB4 309 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 C15orf40Q8WUR7 153 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 H1FXQ92522 213 aaKnown RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 MAL2Q969L2 176 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 FGFBP2Q9BYJ0 223 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 TUBA4BQ9H853 241 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 CKLFQ9UBR5 152 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 RAI1Q7Z5J4 1906 aaPredicted RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 PRRC2BQ5JSZ5 2229 aaKnown RBP3.2□□□□□ -1.9
CD44-213ENST00000525209 DNAH12Q6ZR08 3092 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 RALGAPA2Q2PPJ7 1873 aa3.2□□□□□ -1.9
CD44-213ENST00000525209 COL11A1P12107 1806 aaPredicted RBP3.19□□□□□ -1.9
CD44-213ENST00000525209 EYSQ5T1H1 3165 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 PCM1Q15154 2024 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 IGHV3OR15-7A0A075B7D8 119 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 IGKV1-12A0A0C4DH73 117 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 A0A1B0GUV1 79 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 IRGMA1A4Y4 181 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 MEIS3P1A6NDR6 274 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 C9JCJ5 164 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 FAM72CH0Y354 149 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 SOCS1O15524 211 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 SCO1O75880 301 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms