RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 CDS2O95674 445 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 IFNA17P01571 189 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 RNASE2P10153 161 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 ANKRD55Q3KP44 614 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 PVRIGQ6DKI7 326 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 OR51S1Q8NGJ8 323 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 PINX1Q96BK5 328 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 PDCD10Q9BUL8 212 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 HIPK2Q9H2X6 1198 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 A6NJY4 79 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 NUPL2O15504 423 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 MPC2O95563 127 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 Q6ZRM9 215 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 FAM219AQ8IW50 185 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 GLYATL2Q8WU03 294 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 MED9Q9NWA0 146 aa8.35□□□□□ -1.07
TRAPPC4-204ENST00000524797 C15orf62A8K5M9 175 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 SNCAP37840 140 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 AARDQ4LEZ3 155 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 TMEM230Q96A57 120 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 GPR146Q96CH1 333 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 SPAG8Q99932 426 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 NUDT15Q9NV35 164 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 SMPXQ9UHP9 88 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 CBY1Q9Y3M2 126 aa8.34□□□□□ -1.07
TRAPPC4-204ENST00000524797 IGHV7-4-1A0A0J9YVY3 117 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 GNG7O60262 68 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 SULT1A3P0DMM9 295 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 SULT1A4P0DMN0 295 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 LYL1P12980 280 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 SUB1P53999 127 aaKnown RBP eCLIP8.33□□□□□ -1.082e-10■■■■■ 75.6
TRAPPC4-204ENST00000524797 SPCS3P61009 180 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 CASC10Q5T4H9 136 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 PCNPQ8WW12 178 aaKnown RBP8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 LINC00052Q96N35 136 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 CORTO00230 105 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 TCRBP04435 133 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 TMEM187Q14656 261 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 TMEM268Q5VZI3 342 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 TMEM116Q8NCL8 245 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 OR52E5Q8NH55 327 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 OR10C1Q96KK4 312 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 SCGB3A2Q96PL1 93 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 GGTLC1Q9BX51 225 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 CACNG5Q9UF02 275 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
TRAPPC4-204ENST00000524797 CHEK1O14757 476 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 SSNA1O43805 119 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 YIF1AO95070 293 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 CXCL3P19876 107 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 NPBWR1P48145 328 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 FLI1Q01543 452 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 KLF9Q13886 244 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 OPCMLQ14982 345 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 BSXQ3C1V8 233 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 IL22RA2Q969J5 263 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 C7orf50Q9BRJ6 194 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 PRR13Q9NZ81 148 aa8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 MRPL36Q9P0J6 103 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 KMT2CQ8NEZ4 4911 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-204ENST00000524797 LOC102724200A0A096LPH7 203 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 IGHV3-49A0A0A0MS15 119 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 F8W036 122 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 TMEM50AO95807 157 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 BTCP35070 178 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 ZFAND6Q6FIF0 208 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 TOMM20LQ6UXN7 152 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 OR2T35Q8NGX2 323 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 GALNT14Q96FL9 552 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 RNF2Q99496 336 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 RHPN1-AS1Q9BWJ2 59 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 FNDC4Q9H6D8 234 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 NBEAL2Q6ZNJ1 2754 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 OR4C46A6NHA9 309 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 MLANAQ16655 118 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 ODF3L2Q3SX64 289 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 TOMM5Q8N4H5 51 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 KCNIP3Q9Y2W7 256 aa8.31□□□□□ -1.08
TRAPPC4-204ENST00000524797 TRAV14DV4A0A0A6YYC5 116 aa8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 AKR1C4P17516 323 aa8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 FAUP35544 74 aaKnown RBP8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 OPRK1P41145 380 aa8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 GINS3Q9BRX5 216 aa8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 HEYLQ9NQ87 328 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 PUS1Q9Y606 427 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRAPPC4-204ENST00000524797 IGHV3OR16-13A0A075B7E8 117 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms