RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 OR10C1Q96KK4 312 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 GINS3Q9BRX5 216 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 RTBDNQ9BSG5 229 aaPredicted RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 UCK1Q9HA47 277 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 TAF9BQ9HBM6 251 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 C21orf62Q9NYP8 219 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 OR5AC2Q9NZP5 309 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 DHCR7Q9UBM7 475 aaKnown RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 HDGFL3Q9Y3E1 203 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 MYO7BQ6PIF6 2116 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 ATG2BQ96BY7 2078 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 PCDH15Q96QU1 1955 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 IGHV3-49A0A0A0MS15 119 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 TRAV8-6A0A0B4J262 113 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 C7orf77A4D0Y5 90 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 PSPHP1O15172 72 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 TGOLN2O43493 480 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 MPZL1O95297 269 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 IFNA10P01566 189 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 IFNA6P05013 189 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 CTSDP07339 412 aaPredicted RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 RPL12P30050 165 aaKnown RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 RPS27P42677 84 aaKnown RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 AKR1C2P52895 323 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 EMP2P54851 167 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 AKR1C1Q04828 323 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 SMCO1Q147U7 214 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 EBPQ15125 230 aaKnown RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 RPL7L1Q6DKI1 246 aaKnown RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 GUSBP11Q6P575 273 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 SHISA6Q6ZSJ9 500 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 GRINAQ7Z429 371 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 OOSP2Q86WS3 158 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 ZNF709Q8N972 641 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 TSTD1Q8NFU3 115 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 OR13D1Q8NGV5 346 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 OR5H2Q8NGV7 314 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 OR1L1Q8NH94 360 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 MFSD8Q8NHS3 518 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 GPR119Q8TDV5 335 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 CASTOR1Q8WTX7 329 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 CMBLQ96DG6 245 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 ADAT3Q96EY9 351 aaPredicted RBP3.46□□□□□ -1.86
SKP1-213ENST00000524288 ABHD14BQ96IU4 210 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 ADTRPQ96IZ2 230 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 S100A13Q99584 98 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 RAB1BQ9H0U4 201 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 C11orf1Q9H5F2 150 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 MYO7AQ13402 2215 aa3.46□□□□□ -1.86
SKP1-213ENST00000524288 EML6Q6ZMW3 1958 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 TNRC6AQ8NDV7 1962 aaKnown RBP3.45□□□□□ -1.86
SKP1-213ENST00000524288 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 IGKV2-28A0A075B6P5 120 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 TMED7-TICAM2A0A0A6YYA0 188 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 BORCS7-ASMTA0A0B4J1R7 106 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 TMEM269A0A1B0GVZ9 245 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 CRYM-AS1A6NIL9 109 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 ZNF878C9JN71 531 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 NDUFS6O75380 124 aaKnown RBP3.45□□□□□ -1.86
SKP1-213ENST00000524288 ADAP1O75689 374 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 AHSA1O95433 338 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 IGKV2D-28P01615 120 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 IGLV3-19P01714 112 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 PMP2P02689 132 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 CSN2P05814 226 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 AKR1C4P17516 323 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 HAAOP46952 286 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 SULT1A1P50225 295 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 FABP9Q0Z7S8 132 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 TNXAQ16473 311 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 GUK1Q16774 197 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 C5orf47Q569G3 176 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 TMEM31Q5JXX7 168 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 ZNF880Q6PDB4 577 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 HEPN1Q6WQI6 88 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 Q6ZS52 159 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 DCXRQ7Z4W1 244 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 ZFP82Q8N141 532 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 NECAP1Q8NC96 275 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 OR5D14Q8NGL3 314 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 CCL4L1Q8NHW4 92 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 FNDC9Q8TBE3 224 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 SLC37A2Q8TED4 501 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 ZNF721Q8TF20 911 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 MUCL1Q96DR8 90 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 SLAMF6Q96DU3 332 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 PBDC1Q9BVG4 233 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 SUCNR1Q9BXA5 334 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 CHST5Q9GZS9 411 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 PBOV1Q9GZY1 135 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 SLC35B3Q9H1N7 401 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 FAM60AQ9NP50 221 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 NIT2Q9NQR4 276 aa3.45□□□□□ -1.86
SKP1-213ENST00000524288 ALPK2Q86TB3 2170 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 YLPM1P49750 1951 aaKnown RBP3.44□□□□□ -1.86
SKP1-213ENST00000524288 IGLV3-32A0A0A0MS00 114 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 A0A1B0GW15 77 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 TLCD2A6NGC4 264 aa3.44□□□□□ -1.86
SKP1-213ENST00000524288 MKRN2OSH3BPM6 223 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms