RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 FOXB1Q99853 325 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 DEFB126Q9BYW3 111 aa6.85□□□□□ -1.31
CSMD1-213ENST00000523488 IGFBP2P18065 325 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 GABRG2P18507 467 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 GCSHP23434 173 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 ASPHD1Q5U4P2 390 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 ANKRD37Q7Z713 158 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 ATP6V0E2Q8NHE4 81 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 DAZAP1Q96EP5 407 aaKnown RBP6.84□□□□□ -1.31
CSMD1-213ENST00000523488 FAM234AQ9H0X4 552 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 RABAC1Q9UI14 185 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 R4GN57 208 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 SPTBN1Q01082 2364 aaKnown RBP6.84□□□□□ -1.31
CSMD1-213ENST00000523488 LOC102723996A0A087X1L8 192 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 M0QXV9 152 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 ZFAND5O76080 213 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 NTF4P34130 210 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 CSN1S1P47710 185 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 OR8A1Q8NGG7 326 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 OR9G4Q8NGQ1 327 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 GALMQ96C23 342 aa6.84□□□□□ -1.31
CSMD1-213ENST00000523488 F11RQ9Y624 299 aaKnown RBP6.84□□□□□ -1.31
CSMD1-213ENST00000523488 ZFHX2Q9C0A1 2572 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-213ENST00000523488 PCNX1Q96RV3 2341 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 GFRA3O60609 400 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 FAM87AP0C7U9 286 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 NMUP48645 174 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 RPL30P62888 115 aaKnown RBP6.84□□□□□ -1.32
CSMD1-213ENST00000523488 HBBP68871 147 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 OR9G1Q8NH87 305 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 FAM167A-AS1Q96KT0 104 aa6.84□□□□□ -1.32
CSMD1-213ENST00000523488 AKAP6Q13023 2319 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 SPAARA0A1B0GVQ0 90 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 C3orf80F5H4A9 247 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 IGHV3-9P01782 118 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 ZNF138P52744 262 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 SPEM1Q8N4L4 309 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 KLF7O75840 302 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CCL2P13500 99 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 RAC3P60763 192 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 PRSS3P2Q8NHM4 247 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 SNRNP40Q96DI7 357 aaKnown RBP6.83□□□□□ -1.32
CSMD1-213ENST00000523488 SPANXB1Q9NS25 103 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-213ENST00000523488 A0A096LNJ9 63 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 GGTLC3B5MD39 225 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 FCGR3BO75015 233 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 NGFP01138 241 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CT45A6P0DMU7 189 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CT45A5P0DMU8 189 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CT45A7P0DMV0 189 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CD24P25063 80 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CT45A1Q5HYN5 189 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 COX8CQ7Z4L0 72 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 PIP4P1Q86T03 277 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 TDHQ8IZJ6 230 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 OR4X2Q8NGF9 303 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 OR10D3Q8NH80 312 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 CT45A3Q8NHU0 189 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 Q8TCH9 128 aa6.83□□□□□ -1.32
CSMD1-213ENST00000523488 RALYQ9UKM9 306 aaKnown RBP6.83□□□□□ -1.32
CSMD1-213ENST00000523488 IGHG3P01860 377 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 GPR12P47775 334 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 GNG3P63215 75 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 UBE2L3P68036 154 aaKnown RBP6.82□□□□□ -1.32
CSMD1-213ENST00000523488 CCDC144NLQ6NUI1 221 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 DOCK7Q96N67 2140 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 IGHV3-64DA0A0J9YX35 117 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 KBTBD11-OT1A0A1B0GTJ5 212 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 C19orf67A6NJJ6 358 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 HAX1O00165 279 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 ETDBQ3ZM63 59 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 ZNF493Q6ZR52 646 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 GGNQ86UU5 652 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 RPS19BP1Q86WX3 136 aaKnown RBP6.82□□□□□ -1.32
CSMD1-213ENST00000523488 PLPPR2Q96GM1 343 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 NABP2Q9BQ15 211 aa6.82□□□□□ -1.32
CSMD1-213ENST00000523488 FOXA2Q9Y261 457 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-213ENST00000523488 KIR2DL2P43627 348 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 CXCL12P48061 93 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 TMEM177Q53S58 311 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 MRPL32Q9BYC8 188 aaKnown RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 AMMECR1Q9Y4X0 333 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 LINC00312Q9Y6C7 94 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 PI4KAP42356 2102 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 A8MWL6 223 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 DUX1O43812 170 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 CELA3AP09093 270 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 MRPS21P82921 87 aaKnown RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 LINC00479Q96M42 142 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 ZNF714Q96N38 554 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 MRPL16Q9NX20 251 aaKnown RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 PRRC2CQ9Y520 2896 aaKnown RBP6.81□□□□□ -1.32
CSMD1-213ENST00000523488 COL6A6A6NMZ7 2263 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms