RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SMCO1Q147U7 214 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 RBMS2Q15434 407 aaKnown RBP13.77□□□□□ -0.21
SPIDR-220ENST00000522900 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 CCDC190Q86UF4 302 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 LGI3Q8N145 548 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 RNF183Q96D59 192 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 RBKSQ9H477 322 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 HSPB7Q9UBY9 170 aa13.77□□□□□ -0.21
SPIDR-220ENST00000522900 TRAV30A0A087WSZ9 112 aa13.76□□□□□ -0.21
SPIDR-220ENST00000522900 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-220ENST00000522900 SLC25A4P12235 298 aa13.76□□□□□ -0.21
SPIDR-220ENST00000522900 NPY1RP25929 384 aa13.76□□□□□ -0.21
SPIDR-220ENST00000522900 FAUP35544 74 aaKnown RBP13.76□□□□□ -0.21
SPIDR-220ENST00000522900 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
SPIDR-220ENST00000522900 METTL26Q96S19 204 aa13.76□□□□□ -0.21
SPIDR-220ENST00000522900 IFNA10P01566 189 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 CD5P06127 495 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 OR10J1P30954 320 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 S100A5P33763 92 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 AP3S2P59780 193 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 DEFB131AP59861 70 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 LYG2Q86SG7 212 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 DTD1Q8TEA8 209 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 CSTL1Q9H114 145 aa13.75□□□□□ -0.21
SPIDR-220ENST00000522900 A0A1W2PS18 150 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 ANXA3P12429 323 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 P2RY1P47900 373 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 YPEL3P61236 119 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-220ENST00000522900 OR1S2Q8NGQ3 325 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 Q8WTZ3 238 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 ACY3Q96HD9 319 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 TMEM231Q9H6L2 316 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 RABAC1Q9UI14 185 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 U3KQE9 123 aa13.74□□□□□ -0.21
SPIDR-220ENST00000522900 SCGB2A1O75556 95 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 SRPXP78539 464 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 TMEM128Q5BJH2 165 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 ETFRF1Q6IPR1 90 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 STXBP6Q8NFX7 210 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 OR1S1Q8NH92 325 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 LYSTQ99698 3801 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 CACFD1Q9UGQ2 172 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 U3KQ87 197 aa13.73□□□□□ -0.21
SPIDR-220ENST00000522900 TRAV2A0A0B4J234 112 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 MPTX1A8MV57 137 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 K7EQG2 157 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 PITX3O75364 302 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 VAMP1P23763 118 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 USF2Q15853 346 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-220ENST00000522900 NOXA1Q86UR1 476 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 SLC25A21Q9BQT8 299 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-220ENST00000522900 SRRQ9GZT4 340 aa13.72□□□□□ -0.21
SPIDR-220ENST00000522900 PPP1R1AQ13522 171 aa13.71□□□□□ -0.21
SPIDR-220ENST00000522900 PMS2P11Q13670 270 aa13.71□□□□□ -0.21
SPIDR-220ENST00000522900 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-220ENST00000522900 SFT2D2O95562 160 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 IFNA4P05014 189 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 IL4P05112 153 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 HNRNPCP07910 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPIDR-220ENST00000522900 RD3LP0DJH9 198 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 BAK1Q16611 211 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 LRTM2Q8N967 370 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 DCANP1Q8TF63 244 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 NARS2Q96I59 477 aaKnown RBP13.7□□□□□ -0.22
SPIDR-220ENST00000522900 HYDINQ4G0P3 5121 aa13.7□□□□□ -0.22
SPIDR-220ENST00000522900 DUXBA0A1W2PPF3 345 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 TOMM40O96008 361 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 ZNF688P0C7X2 276 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 IAPPP10997 89 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 PSG1P11464 419 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 DEDD2Q8WXF8 326 aa13.69□□□□□ -0.22
SPIDR-220ENST00000522900 KNCNA6PVL3 124 aa13.68□□□□□ -0.22
SPIDR-220ENST00000522900 GAMTQ14353 236 aa13.68□□□□□ -0.22
SPIDR-220ENST00000522900 CENPSQ8N2Z9 138 aa13.68□□□□□ -0.22
SPIDR-220ENST00000522900 OR51G1Q8NGK1 321 aa13.68□□□□□ -0.22
SPIDR-220ENST00000522900 GRAMD2BQ96HH9 432 aa13.68□□□□□ -0.22
SPIDR-220ENST00000522900 RARRES2Q99969 163 aa13.68□□□□□ -0.22
SPIDR-220ENST00000522900 IGKV1D-37A0A075B6S9 117 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 JTBO76095 146 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 CA1P00915 261 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-220ENST00000522900 HOXB5P09067 269 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 GPX4P36969 197 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-220ENST00000522900 ZNF90Q03938 601 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 SDHCQ99643 169 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-220ENST00000522900 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 FLVCR2Q9UPI3 526 aa13.67□□□□□ -0.22
SPIDR-220ENST00000522900 PLECQ15149 4684 aaKnown RBP13.66□□□□□ -0.22
SPIDR-220ENST00000522900 LINC00854A0A1B0GVQ3 168 aa13.66□□□□□ -0.22
SPIDR-220ENST00000522900 BUB3O43684 328 aa13.66□□□□□ -0.22
SPIDR-220ENST00000522900 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-220ENST00000522900 SLC25A6P12236 298 aa13.66□□□□□ -0.22
SPIDR-220ENST00000522900 ATP5IP56385 69 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-220ENST00000522900 DHRS2Q13268 280 aa13.66□□□□□ -0.22
SPIDR-220ENST00000522900 STHQ8IWL8 128 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms